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Table 3 Number (%) of GLEAN transcripts and exons with overlap to gene prediction sets

From: Creating a honey bee consensus gene set

 

Drosophila Ortholog

Ensembl

Evolutionary Conserved Core

Fgenesh

NCBI

Transcript 80% overlap

5,532 (55)

8,806 (84)

7,789 (81)

9,873 (98)

8,770 (93)

Transcript 80% both overlap

2,559 (256)

4,032 (40)

4,776 (47)

6,323 (62)

7,117 (70)

Transcript exact overlap

232 (2)

706 (7)

1,451 (14)

3,595 (35)

3,757 (37)

Exon 80% overlap

26,290 (41)

46,424 (72)

48,902 (75)

61,053 (94)

61,890 (95)

Exon 80% both overlap

22,566 (35)

37,805 (58)

43,023 (66)

56,442 (87)

57,128 (88)

Exon exact overlap

16,621 (26)

26,440 (41)

38,040 (59)

51,618 (79)

53,435 (82)