Skip to main content

Table 3 Number (%) of GLEAN transcripts and exons with overlap to gene prediction sets

From: Creating a honey bee consensus gene set

  Drosophila Ortholog Ensembl Evolutionary Conserved Core Fgenesh NCBI
Transcript 80% overlap 5,532 (55) 8,806 (84) 7,789 (81) 9,873 (98) 8,770 (93)
Transcript 80% both overlap 2,559 (256) 4,032 (40) 4,776 (47) 6,323 (62) 7,117 (70)
Transcript exact overlap 232 (2) 706 (7) 1,451 (14) 3,595 (35) 3,757 (37)
Exon 80% overlap 26,290 (41) 46,424 (72) 48,902 (75) 61,053 (94) 61,890 (95)
Exon 80% both overlap 22,566 (35) 37,805 (58) 43,023 (66) 56,442 (87) 57,128 (88)
Exon exact overlap 16,621 (26) 26,440 (41) 38,040 (59) 51,618 (79) 53,435 (82)