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Table 2 General Statistics for GLEAN and input gene prediction sets.

From: Creating a honey bee consensus gene set

   GLEAN Drosophila Ortholog Ensembl Evolutionary Conserved Core Fgenesh NCBI
Genes Count 10,157 5,842 13,397 10,960 32,576 9,414
All transcripts Count 10,157 8,875 27,663 10,960 32,576 9,744
  Average length 8,288 4,053 5,633 6,573 2,054 9,909
  Average coding length 1,620 1,136 1,085 1,430 635 1,728
  Ave exons per 6.4 4.8 6.2 5.9 3.5 7.4
Complete transcripts Count 9,722 460 2,923 3,918 31,003 7,966
  Average length 8,415 3,486 2,180 6,563 2,096 10,388
  Average coding length 1,644 1,112 631 1,545 631 1,808
  Ave exons per 6.5 5.2 3.7 6.3 3.5 7.8
Single exon transcripts Count 705 34 421 275 882 194
  Average length 925 904 186 739 615 1,325
All exons Count 64,975 27,672 13,2964 60,601 113,465 70,627
  Average length 253 239 163 243 182 234
Introns Count 54,818 21,254 101,056 49,587 80,889 61,107
  Average length 1,235 700 1,016 1,089 571 1,287
Splice acceptors Count 55,249 26,532 125,739 55,192 82,024 61,903
Splice donors Count 54,831 26,444 127,760 53,653 81,469 62,762
Start codons Count 9,726 1,639 8,110 5,501 31,441 8,949
Stop codons Count 10,144 1,857 6,153 7,133 31,996 8,123