Figure 3

Mean RVM weights for horizontal and vertical component inputs. The figure shows the means, with p = 0.05 two-tail error bars, for weights assigned to inputs by acceptor site-type-pair RVMs in Classifier Two, averaging over all 20 pairings of decoy with true site types. The presence component has a single score. Two-letter abbreviations are used for the species-specific scores output by the horizontal component, while the vertical-component quantities are for eight 25 base-pair subregions (only six of which ever get non-zero scores) with one gap score. Species abbreviations are as in Figure 1.