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Table 8 Fprom predictions on some GenBank entries with experimentally verified TSS

From: Automatic annotation of eukaryotic genes, pseudogenes and promoters

Gene GenBank accession number Length (bp) True TSS Predicted TSS Number of false positives
CXCR4 AJ224869 8,747 2,632 2,632 7
HOX3D X61755 4,968 2,280 2,223 7
DAF M64356 2,003 733 795 2
GJB1 L47127 950 404 415 2
ID4 AF030295 1,473 1,066 1,095 2
C inhibitor M68516 15,571 2,200 2,049 2
MBD1 AJ132338 2,951 1,964 1,891 1
Id -3 X73428 2,481 665 637 4
  1. GenBank entries are from [27].