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Table 6 Accuracy of gene prediction using similar Drosophila proteins

From: Automatic annotation of eukaryotic genes, pseudogenes and promoters

  Sn ex Sno ex Sp ex Sn nuc Sp nuc CC %CG
Similarity of Drosophila protein >80% in 66 sequences
   Fgenesh 90.5 93.8 95.1 97.9 96.9 0.950 55
   Genewise 79.3 83.9 86.8 97.3 99.5 0.985 23
   Fgenesh+ 95.1 97.8 97.0 98.9 99.5 0.9914 70
   Prot_map 86.4 95.3 88.1 97.6 99.0 0.982 41
60% < similarity of Drosophila protein <80% in 290 sequences
   Fgenesh 88.6 93.1 90.8 94.9 93.8 0.941 34
   Genewise 76.3 91.8 82.9 92.8 99.4 0.959 7
   Fgenesh+ 89.2 94.4 92.7 95.5 98.5 0.968 44
   Prot_map 75.1 92.5 74.9 91.4 97.5 0.941 10