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Table 3 Fractional coverage of genomes

From: PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification

Model organism

Number of sequences

Fractional coverage

Homo sapiens

27,960

0.82

Escerichia coli

4,237

0.70

Arabidopsis thaliana

26,207

0.75

Caenorhabditis elegans

26,032

0.64

Drosophila melanogaster

19,178

0.74

  1. The fraction of sequences from different model organisms that can be functionally classified by PhyloFacts to one of the books in the resource, based on BLAST search against PhyloFacts training sequences, using an E-value cutoff of 0.001.
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Genome Biology

ISSN: 1474-760X

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