Table 1 Genomic coordinates of ERE-like sequences that have been experimentally validated or rejected as ER-binding
Name | Genomic location | Pattern | Validation | Reference |
|---|---|---|---|---|
PDZK1 | chr1:143,215,756-143,215,768 | GGTCAcccAGTCC | Binding | This study |
ADORA1 | chr1:199,790,269-199,790,281 | GGTTAgggTGACC | Binding | [10] and this study |
ADORA1 | chr1:199,790,414-199,790,426 | GGTGTcttTGACC | Binding | This study |
AGT | chr1:227,156,613-227,156,625 | GGGCAtcgTGACC | Binding | [4] |
GREB1 | chr2:11,603,634-11,603,646 | GGTCAaaaTGACC | Binding | [10] |
GREB1 | chr2:11,615,324-11,615,336 | GGTCAtcaTGACC | Binding | [10] |
GREB1 | chr2:11,621,861-11,621,873 | AGTCAgtgTCACC | Binding | This study |
GREB1 | chr2:11,623,258-11,623,270 | GGTCAttcTGACC | Binding | [8,10] |
CYP1B1 | chr2:38,214,993-38,215,005 | GGTCGcgcTGCCC | Binding | This study |
CYP1B1 | chr2:38,215,049-38,215,061 | GGTCAaagCGGCC | Binding | This study |
LTF | chr3:46,481,739-46,481,751 | GGTCAaggCGATC | Binding | [10] |
AREG | chr4:75,676,340-75,676,352 | GGACAaggTGTCC | Binding | This study |
ELOVL2 | chr6:11,154,748-11,154,760 | GGTCAtctTGATG | Binding | This study |
VEGF | chr6:43,844,381-43,844,393 | AATCAgacTGACT | Binding | [4] |
LY6E | chr8:144,170,802-144,170,814 | GGACAagaTGACC | Binding | [10] |
PTGES | chr9:129,597,654-129,597,666 | GGACAgccTGGCC | Binding | This study |
CASP7 | chr10:115,428,398-115,428,410 | GGTCAgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,492-115,428,504 | GGTCGgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,572-115,428,584 | GGTCAgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,612-115,428,624 | GGTCAgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,652-115,428,664 | GGTCAgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,689-115,428,701 | GGTCAgggTGAAC | Binding | [10] |
CASP7 | chr10:115,428,743-115,428,755 | GGTCAgggTGAAC | Binding | [10] |
CTSD | chr11:1,741,924-1,741,936 | GGCCGggcTGACC | Binding | [4] |
PGR | chr11:100,504,595-100,504,607 | GGTCAccaGCTCT | Binding | [4] |
PGR | chr11:100,505,180-100,505,192 | GCAGGagcTGACC | Binding | [4] |
SCNN1A | chr12:6,355,536-6,355,548 | GGTCAgccTCACC | Binding | [10] |
GAPDH | chr12:6,513,208-6,513,220 | GGACAtcgTGACC | Binding | [10] |
ESR2 | chr14:63,879,248-63,879,260 | GGTCAggcTGGTC | Binding | [4] |
FLJ30973 | chr15:55,670,850-55,670,862 | GGGCAgtgTGGCC | Binding | This study |
FLJ30973 | chr15:55,671,545-55,671,557 | GGTCAcccTGCTC | Binding | This study |
ABCA3 | chr16:2,319,793-2,319,805 | GGTCAcggTGTTC | Binding | [8] |
IGFBP4 | chr17:35,849,113-35,849,125 | GGTCAttgTGACA | Binding | [10] |
TRIM25 | chr17:52,323,321-52,323,333 | GGTCAtggTGACC | Binding | [4], [10] |
BCL2 | chr18:59,136,673-59,136,685 | GGTCGccaGGACC | Binding | [4] |
MGC26694 | chr19:19,035,118-19,035,130 | GTTCAgagTGACC | Binding | This study |
GRAMD1A | chr19:40,182,519-40,182,531 | GGCCTggcTGACC | Binding | This study |
ACTN4 | chr19:43,897,093-43,897,105 | GGTCActgTGACT | Binding | This study |
GPR77 | chr19:52,532,131-52,532,143 | GGTCActcTGACA | Binding | This study |
C3 | chr19:6,671,884-6,671,902 | GGTGGcccTGACC | Binding | [4] |
NRIP1 | chr21:15,359,833-15,359,845 | GGTCAaagTGACC | Binding | [8] |
TFF1 | chr21:42,659,626-42,659,638 | GGTCCtggTGTCC | Binding | This study |
TFF1 | chr21:42,659,906-42,659,918 | AGCCAagaTGACC | Binding | This study |
TFF1 | chr21:42,660,106-42,660,118 | GGTCAcggTGGCC | Binding | [4] |
CRKL | chr22:19,595,695-19,595,707 | AGTCAatcTAACC | Binding | This study |
TSHB | chr1:115,283,928-115,283,940 | GGTCAgctTGACA | Nonbinding | [10] |
TXNIP | chr1:142,927,222-142,927,234 | GGTCAgtgGGATC | Nonbinding | This study |
LOR | chr1:150,045,850-150,045,862 | GGTCCaaaGGACC | Nonbinding | This study |
GREB1 | chr2:11,622,443-11,622,455 | TGCCAccaTGACC | Nonbinding | This study |
GREB1 | chr2:11,625,143-11,625,155 | TGTCAatcTGTCC | Nonbinding | This study |
EN1 | chr2:119,322,563-119,322,575 | GGTTAcccTGAAC | Nonbinding | This study |
UGCGL1 | chr2:128,563,200-128,563,212 | TGTCAaaaTGTCC | Nonbinding | This study |
UGCGL1 | chr2:128,565,292-128,565,304 | TGTCAcatTGAGC | Nonbinding | This study |
PLGLB1 | chr2:87,884,778-87,884,790 | GGTCAgtgTGCCA | Nonbinding | This study |
SIAH2 | chr3:151,966,545-151,966,557 | GCTCAtagTGCCC | Nonbinding | This study |
ATP13A3 | chr3:195,656,453-195,656,465 | GGTCAttaATACC | Nonbinding | This study |
CISH | chr3:50,626,609-50,626,621 | GGCCAgagGGACC | Nonbinding | This study |
LMCD1 | chr3:8,517,591-8,517,603 | GGCCTgcaTGACC | Nonbinding | This study |
FLJ22269 | chr4:673,249-673,261 | GGGCAgagTGACT | Nonbinding | This study |
CCNG2 | chr4:78,433,176-78,433,188 | GGACAactTGATC | Nonbinding | This study |
STC2 | chr5:172,689,912-172,689,924 | GGGCAatgTGAAC | Nonbinding | This study |
IL6ST | chr5:55,327,909-55,327,921 | GGTGAgcaTGATC | Nonbinding | This study |
PLK2 | chr5:57,792,972-57,792,984 | GGTTAcagCGACC | Nonbinding | This study |
OLIG3 | chr6:137,857,308-137,857,320 | CGTCAtccTAACC | Nonbinding | This study |
FKBPL | chr6:32,206,228-32,206,240 | GGCCAgccCGACC | Nonbinding | This study |
FKBPL | chr6:32,206,311-32,206,323 | CGCCAccaTGACC | Nonbinding | This study |
SERPINE1 | chr7:100,361,980-100,361,992 | GACCAgccTGACC | Nonbinding | This study |
SERPINE1 | chr7:100,362,938-100,362,950 | GGACAagcTGCCC | Nonbinding | This study |
SERPINE1 | chr7:100,363,852-100,363,864 | TGTCAagaAGACC | Nonbinding | This study |
TSPAN13 | chr7:16,566,080-16,566,092 | GATAAgtcTGACC | Nonbinding | This study |
BLVRA | chr7:43,570,289-43,570,301 | GGTCActcTGGCT | Nonbinding | This study |
BLVRA | chr7:43,570,774-43,570,786 | AGTCAaccTTACC | Nonbinding | This study |
B4GALT1 | chr9:33,157,593-33,157,605 | GCTCAacgCGACC | Nonbinding | This study |
B4GALT1 | chr9:33,158,622-33,158,634 | GATCAgaaGGACC | Nonbinding | This study |
DNAJC1 | chr10:22,333,030-22,333,042 | GTTCAactTGTCC | Nonbinding | This study |
GAD2 | chr10:26,545,037-26,545,049 | GGTCGcagTGACC | Nonbinding | [10] |
CXCL12 | chr10:44,202,437-44,202,449 | GGTCCagcTGCCC | Nonbinding | This study |
CXCL12 | chr10:44,203,283-44,203,295 | TGTCAaaaTGGCC | Nonbinding | This study |
PGR | chr11:100,509,203-100,509,215 | AGTCAtgtTGACA | Nonbinding | This study |
DGKZ | chr11:46,321,832-46,321,844 | GGCCAtgcTGGCC | Nonbinding | This study |
CTSW | chr11:65,403,499-65,403,511 | GACCAgccTGACC | Nonbinding | This study |
C14orf131 | chr14:101,872,078-101,872,090 | GGCCAacaTGACA | Nonbinding | This study |
DLG7 | chr14:54,727,987-54,727,999 | GGTCGtccAGACC | Nonbinding | This study |
ESR2 | chr14:63,876,354-63,876,366 | GACCAgccTGACC | Nonbinding | This study |
THBS1 | chr15:37,657,943-37,657,955 | GGTCAatcCCACC | Nonbinding | This study |
FLJ13710 | chr15:69,737,514-69,737,526 | AGTCAttgTTACC | Nonbinding | This study |
FLJ13710 | chr15:69,738,257-69,738,269 | GGTCAatgTGCGC | Nonbinding | This study |
FLJ13710 | chr15:69,738,459-69,738,471 | GCTCActtTGTCC | Nonbinding | This study |
SH3GL3 | chr15:82,077,053-82,077,065 | GATCTtgcTGACC | Nonbinding | This study |
SMAP-1 | chr15:89,278,745-89,278,757 | AGTCAatcTGTCC | Nonbinding | This study |
ABCA3 | chr16:2,321,166-2,321,178 | GGTCTtttTTACC | Nonbinding | This study |
HCFC1R1 | chr16:3,015,149-3,015,161 | GACCAgccTGACC | Nonbinding | This study |
ADCY9 | chr16:4,107,737-4,107,749 | GGTCAggcTGGTC | Nonbinding | This study |
ADCY9 | chr16:4,108,935-4,108,947 | GGTGAaaaTGTCC | Nonbinding | This study |
CAPNS2 | chr16:54,100,244-54,100,256 | GGTCCgtcCGACC | Nonbinding | This study |
PAFAH1B1 | chr17:2,441,502-2,441,514 | CGCCAtgtTGACC | Nonbinding | This study |
IGFBP4 | chr17:35,851,519-35,851,531 | GATCActgTAACC | Nonbinding | This study |
IGFBP4 | chr17:35,853,510-35,853,522 | GGTCAtgcTGCCC | Nonbinding | This study |
RBBP8 | chr18:18,766,140-18,766,152 | GGTCAttcTGCTC | Nonbinding | This study |
MKNK2 | chr19:2,382,491-2,382,503 | GGGCAgagTGAGC | Nonbinding | This study |
BBC3 | chr19:52,426,840-52,426,852 | TGTCAttgTGTCC | Nonbinding | This study |
BBC3 | chr19:52,427,249-52,427,261 | GGTCAggcTGGTC | Nonbinding | This study |
GPBP6 | chrY:169,893-169,905 | GCTCAcgaTGACG | Nonbinding | This study |