Figure 3
From: Sex-specific expression of alternative transcripts in Drosophila
Examples of transcript clustering. Transcripts were clustered by BLAT and then aligned in ClustalW. Some of the more common clustering patterns are depicted. (a) Two transcripts, each with a unique region of at least 80 bases and a common region of at least 80 bases; (b) two transcripts, each with a unique region of at least 80 bases, and a common region between 40 and 79 bases; (c) two transcripts with a common region of at least 80 bases, a unique region of at least 80 bases and a unique region of at least 50 bases; (d) two sequences with a gapped alignment.