Table 2 False-positive and false-negative rates of peptide identifications in liver tissue predicted by PeptideProphet at different probability thresholds
From: UniPep - a database for human N-linked glycosites: a resource for biomarker discovery
Probability score cutoff | False-negative rate | False-positive rate |
|---|---|---|
0.99 | 0.6042 | 0.0025 |
0.95 | 0.4037 | 0.0099 |
0.90 | 0.3297 | 0.0172 |
0.80 | 0.2621 | 0.0304 |
0.70 | 0.2252 | 0.0437 |
0.60 | 0.1964 | 0.0593 |
0.50 | 0.1713 | 0.0787 |
0.40 | 0.1440 | 0.1091 |
0.30 | 0.1262 | 0.1364 |
0.20 | 0.1041 | 0.1877 |
0.10 | 0.0724 | 0.3010 |
0.00 | 0.0000 | 0.9295 |