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Table 6 NAGNAG acceptors for seven species

From: Phylogenetically widespread alternative splicing at unusual GYNGYN donors

Species

Number of acceptors*

NAGNAG acceptor

HAGHAG acceptor

Confirmed NAGNAG acceptor

Confirmed HAGHAG acceptor

H. sapiens

164,841

9,465

5.7%†

3,530

37.3%‡

1,511

16%§

1,373

90.9%¶

M. musculus

125,233

7,116

5.7%

2,662

37.4%

1,087

15.3%

1,022

94.0%

R. norvegicus

53,598

3,080

5.7%

1,098

35.6%

215

7.0%

202

94.0%

G. gallus

19,794

1,069

5.4%

401

37.5%

97

9.1%

92

94.8%

D. rerio

29,067

1,540

5.3%

484

31.4%

132

8.6%

118

89.4%

D. melanogaster

39,441

1,584

4.0%

859

54.2%

177

11.2%

170

96.0%

C. elegans

92,867

4,184

4.5%

2,637

63.0%

33

0.8%

33

100.0%

  1. H stands for A, C, or T. *Total number of all unique acceptor sites annotated in RefSeq transcripts. †Number of NAGNAG acceptors/number of all acceptors. ‡Number of HAGHAG acceptors/number of NAGNAG acceptors. §number of confirmed NAGNAG acceptors/number of NAGNAG acceptors. ¶Number of confirmed HAGHAG acceptors/number of confirmed NAGNAG acceptors.