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Table 3 Characteristics of U1 snRNA binding to human confirmed and unconfirmed GYNGYN donors

From: Phylogenetically widespread alternative splicing at unusual GYNGYN donors

 

Average

 

Free energy (kcal/mol)*

Number of base pairs*

Maximum entropy score†

 

i

e

i

e

i

e

Unconfirmed, e annotated

-1.92

-5.46

3.12

6.69

-18.13

7.95

Unconfirmed, i annotated

-5.01

-0.24

6.49

3.30

4.63

-16.02

Confirmed

-3.68

-4.25

4.84

6.09

-5.88

1.65

  1. *Computed with the Splice-site Analyzer tool [67]. †Computed with MaxEntScan [68].