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Table 1 Vector integration sites in clones

From: Slow, stochastic transgene repression with properties of a timer

Clone

Chromosome

Base number

Orientation

Closest gene

Distance (bp)

2

4

119,028,655

+

Hivep3

in intron

3

3

95,092,146

+

Mllt11

347

5

16

76,364,060

-

Nrip1

in intron

6

9

21,506,165

-

Smarca4

5,878

7

10

62,465,169

+

Slc25a16

in exon

12

11

75,541,573

-

Serpinf2

20,524

13

11

118,056,600

+

Socs3

18,534

18

5

141,941,240

+

Actb

1,613

19

11

106,269,600

-

Limd2

417

24

2

158,459,470

+

Ppp1r16b

in intron

  1. Chromosome, base number, and orientation (+/-) correspond to positions defined by the University of California, Santa Cruz Genomics Bioinformatics database for the mouse (August 2005 assembly). The closest known gene to the integration site and its distance to the site are also given.
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Genome Biology

ISSN: 1474-760X

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