From: Benchmarking ortholog identification methods using functional genomics data
Ortholog identification method | Orthologous groups | Protein pairs | Human proteins | Mouse/worm proteins | Average proteome size |
---|---|---|---|---|---|
Hs-Mm | Â | Â | Â | Â | Â |
BBH | - | 12,817 | 12,817 | 12,817 | 12,817 |
INP | 12,610 | 19,482 | 15,344 | 14,545 | 14,939 |
KOG | 7,874 | 810,697 | 20,478 | 15,640 | 18,220 |
MCL | 7,002 | 12,625 | 16,676* | 14,833* | 15,727* |
PGT | - | 85,848 | 17,302 | 15,729 | 16,534 |
Z1H | - | 290,176 | 19,055 | 16,149 | 17,662 |
Hs-Ce | Â | Â | Â | Â | Â |
BBH | - | 5,714 | 5,714 | 5,714 | 5,714 |
INP | 4,135 | 17,011 | 9,282 | 5,784 | 7,327 |
KOG | 4,155 | 155,387 | 12,249 | 9,812 | 10,963 |
MCL | 4,705 | 9,749 | 7,028 | 5,774 | 6,370 |
PGT | - | 49,979 | 12,499 | 8,370 | 10,228 |
Z1H | - | 21,509 | 6,338 | 4,163 | 5,137 |