Table 1 Annotation status of vertebrate and fly genomes
Organism | EST sequences | Genbank mRNA | RefSeq genes | Manual annotations | Ab initio tracks |
|---|---|---|---|---|---|
Homo sapiens | 6,134,812 | 207,905 | 24,293 | 22,421 | 5 |
Pan troglodytes | 4,983 | 947 | None | None | 3 |
Macaca mulatta | 52,754 | 1,766 | None | None | None |
Canis familiaris | 349,306 | 1,666 | None | 45 | 2 |
Bos taurus | 702,434 | 8,046 | None | None | 2 |
Mus musculus | 4,686,082 | 241,865 | 18,757 | 5,501 | 3 |
Rattus norvegicus | 701,072 | 23,017 | 9,012 | None | 5 |
Oryctolagus cuniculus | 28,046 | 2,669 | None | None | None |
Dasypus novemcinctus | None | None | None | None | None |
Loxodonta africana | None | 4 | None | None | None |
Monodelphis domestica | 50 | 363 | None | None | 1 |
Gallus gallus | 578,445 | 29,743 | 3,848 | None | 4 |
Xenopus tropicalis | 1,038,272 | 10,712 | None | None | 1 |
Dana rerio | 673,076 | 25,094 | 10,689 | 3,546 | None |
Tetraodon nigroviridis | 99 | 107,945 | None | None | 2 |
Takifugu rubripes | 25,850 | 978 | None | None | 1 |
Drosophila melanogaster | 383,407 | 19,931 | 19,697 | None | 4 |
D. simulans | 5,013 | 80 | None | None | 2 |
D. yakuba | 11,015 | 808 | None | None | 2 |
D. erecta | None | 6 | None | None | 1 |
D. ananassae | None | 11 | None | None | 1 |
D. pseudoobscura | 35,042 | 40 | None | None | 4 |
D. virilis | 663 | 41 | None | None | 1 |
D. mojavensis | 361 | 2 | None | None | 1 |
D. grimshawi | None | None | None | None | 1 |