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Table 2 Genes that are differentially expressed in the different pair-wise comparisons possible between the categories

From: Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulans

Comparison Total genes (up/down) Metabolic genes (%)
Ethanol versus glucose 418 (249/169) 103 (25%)
Ethanol versus glycerol 206 (92/114) 58 (28%)
Glycerol versus glucose 71 (57/14) 12 (17%)
  1. Shown are the number of genes that are differentially expressed in the different pair-wise comparisons possible between the categories, for a cutoff P value in the logit-t test of 0.01. The total number of genes is presented along with the number of upregulated (up) and downregulated (down) genes (shown in parenthesis). The number (and percentage) of metabolic genes identified within the differentially expressed genes is also shown.