From: An inventory of yeast proteins associated with nucleolar and ribosomal components
Gene | ORF | Hs | At | Ue | It | Kr | Ga | Ho | log(O) | Description |
---|---|---|---|---|---|---|---|---|---|---|
SUA7 | YPR086W | 1 | 0 | 1 | 0 | 1 | 0 | o | 0.665 | TFIIB subunit (transcription initiation factor) factor E |
HTA1 | YDR225W | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0.612 | Histone H2A |
HSC82 | YMR186W | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.697 | Heat shock protein |
TIF1 | YKR059W | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.699 | Translation initiation factor 4A |
PRP4 | YPR178W | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0.703 | U4/U6 snRNP 52 kDa protein |
KAR2 | YJL034W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.684 | Component of ER translocon |
HTA2 | YBL003C | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.724 | Histone H2A.2 |
AAC3 | YBR085W | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0.686 | Mitochondrial ADP/ATP carrier - member of the mitochondrial carrier (MCF) family |
RFC2 | YJR068W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | DNA replication factor C 41 kDa subunit |
TEF1 | YPR080W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Translation elongation factor eEF1 alpha-A chain cytosolic |
SMX2 | YFL017W-A | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.696 | snRNP G protein (the homologue of the human Sm-G) |
BCP1 | YDR361C | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Similarity to hypothetical protein S. pombe |
LEA1 | YPL213W | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.704 | U2 A snRNP protein |
HSP82 | YPL240C | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Heat shock protein |
SMD3 | YLR147C | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.699 | Spliceosomal snRNA-associated Sm core protein required for pre-mRNA splicing |
TIF2 | YJL138C | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0.686 | Translation initiation factor eIF4A |
None | YBR025C | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0.610 | Strong similarity to Ylf1p |
SPT16 | YGL207W | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0.705 | General chromatin factor |
SUI2 | YJR007W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.720 | Translation initiation factor eIF2 alpha chain |
HSH49 | YOR319W | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0.702 | Essential yeast splicing factor |
DED1 | YOR204W | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0.716 | ATP-dependent RNA helicase |
HTB1 | YDR224C | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0.709 | Histone H2B |
HRR25* | YPL204W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.718 | Casein kinase I Ser/Thr/Tyr protein kinase |
SSA2 | YLL024C | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Heat shock protein of HSP70 family cytosolic |
SRP1 | YNL189W | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 0.696 | Karyopherin-alpha or importin |
SUB2 | YDL084W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Probably involved in pre-mRNA splicing |
CKA1 | YIL035C | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0.698 | Casein kinase II catalytic alpha chain |
PRP43* | YGL120C | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 0.695 | Involved in spliceosome disassembly |
SUI3 | YPL237W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.721 | Translation initiation factor eIF2 beta subunit |
DST1 | YGL043W | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0.692 | TFIIS (transcription elongation factor) |
PRP8 | YHR165C | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.721 | U5 snRNP protein pre-mRNA splicing factor |
PRP9 | YDL030W | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0.667 | Pre-mRNA splicing factor (snRNA-associated protein) |
SUP45 | YBR143C | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 0.704 | Translational release factor |
ASC1 | YMR116C | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.698 | 40S small subunit ribosomal protein |
DBP2* | YNL112W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.719 | ATP-dependent RNA helicase of DEAD box family |
CKB2 | YOR039W | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0.710 | Casein kinase II beta chain |
YRA1 | YDR381W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.720 | RNA annealing protein |
GCD11 | YER025W | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0.609 | Translation initiation factor eIF2 gamma chain |
TFG2 | YGR005C | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0.695 | TFIIF subunit (transcription initiation factor) 54 kDa |
TOP1* | YOL006C | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0.693 | DNA topoisomerase I |
BRR2 | YER172C | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0.708 | RNA helicase-related protein |
RVB1 | YDR190C | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0.709 | RUVB-like protein |
MLP1 | YKR095W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.686 | Myosin-like protein related to Uso1p |
HTZ1 | YOL012C | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.685 | Evolutionarily conserved member of the histone H2A F/Z family of histone variants |
ATP2 | YJR121W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.685 | F1F0-ATPase complex F1 beta subunit |
SMD2 | YLR275W | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0.688 | U1 snRNP protein of the Sm class |
PRP3 | YDR473C | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0.704 | Essential splicing factor |
EFT1 | YOR133W | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0.682 | Translation elongation factor eEF2 |
HTB2 | YBL002W | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0.690 | Histone H2B.2 |
TEF4 | YKL081W | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0.718 | Translation elongation factor eEF1 gamma chain |
HHF2 | YNL030W | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0.695 | Histone H4 |
Predictions based solely on protein interactions | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
RPO21 | YDL140C | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.728 | DNA-directed RNA polymerase II 215 kDa subunit |
DHH1 | YDL160C | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0.714 | Putative RNA helicase of the DEAD box family |
CFT1 | YDR301W | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.731 | Pre-mRNA 3-end processing factor CF II |
KAP95 | YLR347C | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 0.689 | Karyopherin-beta |
SPT5 | YML010W | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.732 | Transcription elongation protein |
TAF14 | YPL129W | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.733 | TFIIF subunit (transcription initiation factor) 30 kDa |
RPB3 | YIL021W | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.728 | DNA-directed RNA-polymerase II 45 kDa |
RPO31 | YOR116C | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.729 | DNA-directed RNA polymerase III 160 kDa subunit |
TIF4631 | YGR162W | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.734 | mRNA cap-binding protein (eIF4F) 150K subunit |
PRP24 | YMR268C | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.734 | Pre-mRNA splicing factor |
RET1 | YOR207C | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0.731 | DNA-directed RNA polymerase III 130 kDa subunit |