Table 1 Binding site sequences that are enriched in quiescent T98G cells versus asynchronous T98G cells from DBSS

^aE2F4/DP_consensus

E2F4/DP

TTTSGCGCS

8.221

9

1

element_II_rs-4

element_II_rs-4

TTTCGCG

7.307

8

1

^aE2F_CS

E2F

TTTTSSCGS

7.307

8

1

AP-1-erk1

AP-1

CAGACTAA

6.394

7

1

m4-AP-1_site

AP-1

GTGAGTAA

5.481

6

1

E1A-BS4

E1A-BS4

GTCAAAGT

5.481

6

1

^aE2F_site_(2)

E2F

TTTGGCGC

5.481

6

1

E1A-BS5

E1A-BS5

TCTCAGGTG

5.481

6

1

epsilon-NRA-FP2

undefined

GAGATACC

5.481

6

1

HC5

HC5

CCGAAAC

4.567

10

2

TB3

NF-IL-6

AACTGGAAA

4.567

5

1

GCN4_CS1

GCN4

ATGASTCAT

4.567

10

2

MyoD-MLC_(1)

MyoD

CCAGCTGGC

4.567

5

1

Sp1-t-PA

Sp1

ACCCCGCCC

4.567

10

2

CArG_CS

SRF

CCAWATWWGG

4.567

5

1

RC1/RC2-CYC

RC1/RC2

TGACCGA

4.567

5

1

DHFR-undefined-site-1

DHFR-undefined-site-1

GGATTGGC

4.110

9

2

TopoII_RS

Topoisomerase II

RNYNNCNNGYNGKTNYCY

4.110

9

2

element_II-rs-1

element_II-rs-1

GGCGTAA

3.654

4

1

C/EBP-TTRS3

C/EBP

TCTTACTC

3.654

8

2

Sp1-Vdac2

Sp1

CCTCGCCTC

3.654

4

1

glide/gcm_CS

glide/gcm

ATRCGGGY

3.654

4

1

spB-4bp

STAT3

TTCCGGAA

3.654

4

1

C/EBP-AT-Site-C.2

C/EBP

TCTTAAGC

3.654

8

2

PUT2_UAS2; PUT2_UAS.2

PUT3

GAAGCCGA

3.654

4

1

NFkB_CS2

NF-kB

RGGGRMTYYCC

3.349

11

3

^aE2F_site_(3)

E2F

TTGGCGC

3.288

18

5

NF-E2_CS

NF-E2_CS

TGACTCAGC

3.197

7

2

^aE2F_CS.2

E2F

SCGSGAAAA

N/A

7

0

AluA

AluA

GGAGGCTGAGGCA

N/A

6

0

^aE2F_CS.1

E2F

TTTCGCGC

N/A

5

0

Swi4-mdscan-motif-3

Swi6

AAACGCG

N/A

5

0

E-box/ATF/CREB_site

Ebox protein/ATF/CREB

GTGACGCA

N/A

5

0

GCN4-his3-189

GCN4

ATGACTCAT

N/A

4

0

GCF-beta-actin_(2)

GCF

GCGCGGGCCG

N/A

4

0

Sp1-XIST_(1)

Sp1

GGCCACGCC

N/A

4

0

rMT-III-motif-9

undefined

CAGGCACCT

N/A

4

0

DBP-CS

DBP

RTTAYGTAAR

N/A

4

0

CDF1_RS

CDF1

CTAAATAC

N/A

4

0

alphaA-crystallin-PE2A

AP-1

CTGACTCAC

N/A

4

0

^aE2F-myc

E2F

GCGGGAAAA

N/A

4

0