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Table 1 List of currently sequenced genomes from the family Enterobacteriaceae of the γ-Proteobacteria

From: Leaner and meaner genomes in Escherichia coli

Number of proteins Genome size (bp) Organism %AT Number of tRNA genes Number of rRNA genes Accession number
5,379 5,231,428 Escherichia coli CFT073 49.5 89 7 AE014075
5,361 5,498,450 Escherichia coli O157 RIMD 49.5 105 7 BA000007
5,349 5,528,445 Escherichia coli O157 EDL 49.5 98 7 AE005174
5,066 5,065,741 Escherichia coli UTI89 49.4 88 7 CP000243
4,905 5,688,987 Photorhabdus luminescens 57.2 85 7 AP009048
4,685 4,938,920 Escherichia coli strain 536 49.5 81 7 CP000247
4,600 4,809,037 Salmonella enterica CT18 47.9 79 7 AL513382
4,492 5,064,019 Erwinia carotovora 49.0 76 7 BX950851
4,452 4,857,432 Salmonella typhimurium LT2 47.8 85 7 AE006468
4,445 4,755,700 Salmonella enterica SCB67 47.8 85 7 AE017220
4,436 4,607,203 Shigella flexneri 2a301 49.1 97 7 AE005674
4,337 4,646,332 Escherichia coli K-12 W3110 49.2 86 7 U00096
4,331 4,639,675 Escherichia coli K-12 MG1655 49.2 86 7 AP009048
4,323 4,791,961 Salmonella enterica Ty2 47.2 78 7 AE014613
4,277 4,369,232 Shigella dysenteriae Sd197 48.8 85 7 CP000034
4,224 4,825,265 Shigella sonnei Ss046 49.0 97 7 CP000038
4,167 4,702,289 Yersinia pestis Antiqua 52.3 68 7 CP000308
4,142 4,519,823 Shigella boydii Sb227 48.8 91 7 CP000036
4,116 4,574,284 Shigella flexneri 5str8401 49.1 91 7 CP000266
4,093 4,585,229 Salmonella enterica ATCC9150 47.8 82 7 CP000026
4,090 4,600,755 Yersinia pestis KIM 52.4 73 7 AE009952
4,073 4,599,354 Shigella flexneri 2457T 49.1 98 7 AE014073
4,011 4,263,492 Escherichia coli MDS12 49.2 86 7 [5]
4,008 4,653,728 Yersinia pestis CO-92 52.4 70 6 AL590842
3,981 4,534,590 Yersinia pestis Nepal516 52.4 72 7 CP000305
3,974 4,744,671 Yersinia pseudotuber IP32953 52.4 85 7 BX936398
3,895 4,595,065 Yersinia pestis Mediaevails 52.3 72 7 AE017042
3,731 3,977,067 Escherichia coli MDS41 49.2 86 7 [5]
3,730 3,976,359 Escherichia coli MDS42 49.2 86 7 [5]
3,691 3,931,408 Escherichia coli MDS43 49.2 86 7 [5]
2,432 4,171,146 Sodalis glossinidius 45.3 69 7 AP008232
611 697,724 Wiggelsworthia glossinidia 77.5 34 2 BA000021
610 791,654 Blochmannia pennsylvanicus 70.4 39 1 CP000016
595 686,194 Baumannia cicadellinicola 61.2 39 2 CP000238
589 705,557 Blochmannia floridanus 72.6 37 1 BX248583
564 640,681 Buchnera aphidicola APS 73.7 32 1 BA000003
545 641,454 Buchnera aphidicola Sg 74.7 32 1 AE013218
504 615,980 Buchnera aphidicola BBp 74.7 32 1 AE016826
  1. The genomes are sorted by the number of genes, from the largest to smallest, and the E. coli genomes are in bold. The multi-deletion series (MDS) strain data are from Posfai et al. [5], and data for the other genomes are from EMBL files (EMBL accession numbers in the last column). An up-to-date table of the enteric genomes sequenced and available so far can be obtained from the GenomeAtlas database [13] by typing in 'BProt GE' in the keyword search.