From: A gold standard set of mechanistically diverse enzyme superfamilies
Superfamily | Family | EC number* | Number of sequences (gold/silver) | Number of structures |
---|---|---|---|---|
Amidohydrolase | Aryldialkylphosphatase | 3.1.8.1 | 2/3 | 0 |
 | Phosphotriesterase | 3.1.8.1 | 7/8 | 12 |
 | Membrane dipeptidase | 3.4.13.19 | 1/1 | 2 |
 | N-acetylglucosamine-6-phosphate deacetylase | 3.5.1.25 | 1/54 | 2 |
 | Urease | 3.5.1.5 | 100/107 | 35 |
 | N-acyl-D-amino-acid deacylase | 3.5.1.81 | 3/11 | 8 |
 | D-hydantoinase | 3.5.2.2 | 10/25 | 4 |
 | L-hydantoinase | 3.5.2.2 | 3/3 | 1 |
 | Dihydroorotase1 | 3.5.2.3 | 3/79 | 0 |
 | Dihydroorotase2 | 3.5.2.3 | 13/13 | 0 |
 | Dihydroorotase3 | 3.5.2.3 | 7/43 | 1 |
 | Allantoinase | 3.5.2.5 | 4/7 | 0 |
 | Imidazolonepropionase | 3.5.2.7 | 1/29 | 0 |
 | Cytosine deaminase | 3.5.4.1 | 9/24 | 7 |
 | Adenine deaminase | 3.5.4.2 | 1/24 | 0 |
 | Guanine deaminase | 3.5.4.3 | 11/34 | 0 |
 | Adenosine deaminase | 3.5.4.4 | 10/20 | 17 |
 | AMP deaminase | 3.5.4.6 | 28/31 | 0 |
 | Hydroxydechloroatrazine ethylaminohydrolase | 3.5.99.3 | 1/2 | 0 |
 | N-isopropylammelide isopropylaminohydrolase | 3.5.99.4 | 1/1 | 0 |
 | 1-Aminocyclopropane-1-carboxylate deaminase | 3.5.99.7 | 1/1 | 0 |
 | Atrazine chlorohydrolase | 3.8.1.8 | 1/1 | 0 |
 | Glucuronate isomerase | 5.3.1.12 | 1/2 | 1 |
 | Ammelide aminohydrolase | NA | 2/2 | 0 |
 | Isoaspartyl dipeptidase | NA | 5/5 | 5 |
 | Melamine deaminase | NA | 1/1 | 0 |
 | N-acetylgalactosamine-6-phosphate deacetylase | NA | 3/5 | 0 |
 | S-triazine hydrolase | NA | 1/1 | 0 |
 | TrzN | NA | 1/1 | 0 |
Crotonase | Histone acetyltransferase | 2.3.1.48 | 11/12 | 0 |
 | 3-Hydroxyisobutyryl-CoA hydrolase | 3.1.2.4 | 2/70 | 0 |
 | 4-Chlorobenzoate dehalogenase | 3.8.1.7 | 1/7 | 2 |
 | Methylmalonyl-CoA decarboxylase | 4.1.1.41 | 1/6 | 2 |
 | Cyclohexa-1,5-dienecarbonyl-CoA hydratase | 4.2.1.100 | 1/3 | 0 |
 | Enoyl-CoA hydratase | 4.2.1.17 | 54/293 | 7 |
 | Methylglutaconyl-CoA hydratase | 4.2.1.18 | 2/5 | 1 |
 | Methylglutaconyl-CoA hydratase 2 | 4.2.1.18 | 2/11 | 0 |
 | Dodecenoyl-CoA delta-isomerase (mitochondrial) | 5.3.3.8 | 2/13 | 1 |
 | Dodecenoyl-CoA delta-isomerase (peroxisomal) | 5.3.3.8 | 1/3 | 4 |
 | Cyclohex-1-enecarboxyl-CoA hydratase | NA | 1/2 | 0 |
 | 1,4-Dihydroxy-2-napthoyl-CoA synthase | NA | 2/56 | 4 |
 | 2-Ketocyclohexanecarboxyl-CoA hydrolase | NA | 1/1 | 0 |
 | Crotonobetainyl-CoA hydratase | NA | 2/15 | 0 |
 | Delta(3,5)-delta(2,4)-dienoyl-CoA isomerase | NA | 3/24 | 1 |
 | Feruloyl-CoA hydratase/lyase | NA | 5/18 | 0 |
Enolase | Enolase | 4.2.1.11 | 215/375 | 20 |
 | Glucarate dehydratase | 4.2.1.40 | 26/31 | 7 |
 | Galactonate dehydratase | 4.2.1.6 | 5/27 | 0 |
 | Methylaspartate ammonia-lyase | 4.3.1.2 | 5/8 | 4 |
 | Mandelate racemase | 5.1.2.2 | 2/3 | 6 |
 | Muconate cycloisomerase | 5.5.1.1 | 14/26 | 5 |
 | Chloromuconate cycloisomerase | 5.5.1.7 | 10/15 | 3 |
 | Dipeptide epimerase | NA | 2/57 | 3 |
 | Ortho-succinylbenzoate synthase | NA | 6/75 | 4 |
Haloacid dehalogenase | Polynucleotide 5'-hydroxyl-kinase carboxy-terminal phosphatase | 2.7.1.78 | 1/1 | 1 |
 | Trehalose-phosphatase | 3.1.3.12 | 1/2 | 0 |
 | Histidinol-phosphatase | 3.1.3.15 | 1/2 | 0 |
 | Phosphoglycolate phosphatase | 3.1.3.18 | 1/14 | 0 |
 | Phosphoglycolate phosphatase 2 | 3.1.3.18 | 1/10 | 0 |
 | Sucrose-phosphatase | 3.1.3.24 | 5/13 | 0 |
 | Phosphoserine phosphatase | 3.1.3.3 | 2/56 | 9 |
 | Deoxy-D-mannose-octulosonate 8-phosphate phosphatase | 3.1.3.45 | 2/16 | 2 |
 | 5'-Nucleotidase | 3.1.3.5 | 1/1 | 3 |
 | 2-Deoxyglucose-6-phosphatase | 3.1.3.68 | 1/2 | 0 |
 | Mannosyl-3-phosphoglycerate phosphatase | 3.1.3.70 | 1/3 | 0 |
 | Phosphonoacetaldehyde hydrolase | 3.11.1.1 | 3/9 | 6 |
 | P-type atpase | 3.6.3.- | 91/735 | 8 |
 | 2-Haloacid dehalogenase | 3.8.1.2 | 7/20 | 8 |
 | Beta-phosphoglucomutase | 5.4.2.6 | 1/21 | 3 |
 | Pyridoxal phosphatase | NA | 1/1 | 0 |
 | Enolase-phosphatase | NA | 1/20 | 0 |
 | Epoxide hydrolase N-terminal phosphatase | NA | 2/2 | 6 |
 | Glycerol-3-phosphate phosphatase | NA | 1/3 | 0 |
 | mdp-1 | NA | 1/2 | 2 |
Vicinal oxygen chelate | 3,4-Dihydroxyphenylacetate 2,3-dioxygenase | 1.13.11.15 | 4/9 | 6 |
 | Catechol 2,3-dioxygenase | 1.13.11.2 | 32/53 | 0 |
 | 4-Hydroxyphenylpyruvate dioxygenase | 1.13.11.27 | 26/69 | 7 |
 | 2,3-Dihydroxybiphenyl dioxygenase | 1.13.11.39 | 23/26 | 16 |
 | 4-Hydroxymandelate synthase | 1.13.11.46 | 1/6 | 0 |
 | Fosfomycin resistance protein FosA | 2.5.1.18 | 2/4 | 6 |
 | Glyoxalase I | 4.4.1.5 | 12/58 | 9 |
 | Methylmalonyl-CoA epimerase | 5.1.99.1 | 5/9 | 2 |
 | 3-Methylcatechol 2,3-dioxygenase | NA | 7/10 | 1 |
 | 2,6-Dichlorohydroquinone dioxygenase | NA | 3/3 | 0 |
 | 2,3-Dihydroxy-p-cumate-3,4-dioxygenase | NA | 2/3 | 0 |
 | 2,2',3-Trihydroxybiphenyl dioxygenase | NA | 4/4 | 0 |
 | 1,2-Dihydroxynaphthalene dioxygenase | NA | 6/17 | 0 |
 | 3-Isopropylcatechol-2,3-dioxygenase | NA | 2/3 | 0 |
 | 2,4,5-Trihydroxytoluene oxygenase | NA | 2/3 | 0 |
 | Fosfomycin resistance protein FosB | NA | 1/9 | 0 |
 | Fosfomycin resistance protein FosX | NA | 2/4 | 1 |