From: A computational method to predict genetically encoded rare amino acids in proteins
Organism | Computationally identified pyrrolysine-proteins* annotated by their homologs |
---|---|
Methanosarcina acetivorans (AE010299) | 1. gi|56678713|gb|AAV95379.1| trimethylamine methyltransferase family protein [Silicibacter pomeroyi DSS-3] |
 | 2. gi|14247242|dbj|BAB57633.1| menaquinone biosynthesis methyltransferase [Staphylococcus aureus subsp. Aureus Mu50] |
 | 3. gi|36785418|emb|CAE14364.1| protein methyltranferase [Photorhabdus luminescens subsp. laumondii TTO1] |
 | 4. gi|56679325|gb|AAV95991.1| trimethylamine methyltransferase family protein [Silicibacter pomeroyi DSS-3] |
 | 5. i|20904823|gb|AAM30145.1| SAM-dependent methyltransferases [Methanosarcina mazei Goe1] |
 | 6. gi|56312282|emb|CAI06927.1| predicted methyltransferase [Azoarcus sp. EbN1] |
 | 7. gi|45047608|emb|CAF30735.1| generic methyltransferase [Methanococcus maripaludis] |
 | 8. gi|20905508|gb|AAM30766.1| methylcobalamin: Coenzyme M methyltransferase [Methanosarcina mazei Goe1] |
 | 9. Predicted ORF monomethylamine methyltransferase [Methanosarcina mazei Goe1]†|
 | 10. Predicted ORF monomethylamine methyltransferase [Methanosarcina mazei Goe1]†|
 | 11. Predicted ORF dimethylamine methyltransferase [Methanosarcina mazei Goe1]†|
 | 12. Predicted ORF dimethylamine methyltransferase [Methanosarcina mazei Goe1]†|
 | 13. Predicted ORF dimethylamine methyltransferase [Methanosarcina mazei Goe1]†|
Methanosarcina mazei (AE008384) | 1. gi|19914316|gb|AAM03972.1| trimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 2. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 3. gi|19914753|gb|AAM04365.1| trimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 4. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 5. gi|19914755|gb|AAM04366.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 6. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 7. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
Methanosarcina barkeri (draft genome) | 1. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 2. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 3. gi|19914316|gb|AAM03972.1| trimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 4. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 5. gi|19914334|gb|AAM03988.1| protein-L-isoaspartate (D-aspartate) O-methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 6. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 7. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
Methanococcoides burtonii (draft genome) | 1. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 2. gi|19914753|gb|AAM04365.1| trimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 3. gi|5458504|emb|CAB49992.1| methlytransferase, putative [Pyrococcus abyssi] |
 | 4. gi|5458504|emb|CAB49992.1| methlytransferase, putative [Pyrococcus abyssi] (overlaps with #3) |
 | 5. gi|19914320|gb|AAM03976.1| dimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 6. gi|19914753|gb|AAM04365.1| trimethylamine methyltransferase [Methanosarcina acetivorans str. C2A] |
 | 7. gi|19913899|gb|AAM03597.1| monomethylamine methyltransferase [Methanosarcina acetivorans str. C2A |