E-Predict: a computational strategy for species identification based on observed DNA microarray hybridization patterns

Table 4 Example 1: hepatitis microarray - oligonucleotides contributing to hepatitis B virus profile prediction

Oligonucleotide	Parental virus genome	Virus family	Raw intensity	Raw energy
21326584_16	Hepatitis B virus	Hepadnaviridae	403	102.9
9628700_11_rc	Hepatitis B virus	Hepadnaviridae	316	102.9
9634216_16	Orangutan hepadnavirus	Hepadnaviridae	357	96.6
21326584_25	Hepatitis B virus	Hepadnaviridae	262	109.6
9634216_11_rc	Orangutan hepadnavirus	Hepadnaviridae	308	99.1
9634216_11	Orangutan hepadnavirus	Hepadnaviridae	288	99.1
9630370_16	Woolly monkey hepatitis B virus	Hepadnaviridae	464	72.2
9628700_20_rc	Hepatitis B virus	Hepadnaviridae	160	120
21326584_9	Hepatitis B virus	Hepadnaviridae	175	104.7
9628700_4	Hepatitis B virus	Hepadnaviridae	153	104.7

Ten oligonucleotides contributing most to the hepatitis B virus similarity score are shown sorted by their relative contribution (product of normalized intensity and normalized energy values).

ISSN: 1474-760X