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Table 3 Nineteen candidate genes with cis-eQTL in chromosome 19 locus

From: Genomic analysis of metabolic pathway gene expression in mice

cis-QTL gene symbol Physical location of the gene (Mb) Estimated physical location of the eQTL (Mb) Correlation with subcutaneous fat mass
RIKEN cDNA 9530025L08 29.5 48.6 -0.29*
Cyp2c40 39.1 40.6 0.24
Col17a1 47.0 40.6 -0.25*
Scd2 43.6 40.6 -0.19
Slk 46.9 41.8 -0.07
Cyp2c37 39.3 37.0 0.32*
Cyp2c39 38.8 40.6 0.03
Gsto1 47.2 41.8 0.26*
Rnf134 46.4 48.6 0.05
Cutc 43.1 39.4 0.25*
Cpn1 43.3 39.4 0.28*
Cnnm1 42.8 46.2 0.27*
Acsl5 54.6 37.0 0.30*
RIKEN cDNA 1810018P12 32.0 35.7 0.24
Pik3ap1 40.6 39.4 -0.07
RIKEN cDNA 0610010D20 41.4 41.8 0.10
RIKEN cDNA 4833409A17 42.1 40.6 -0.21
RIKEN cDNA 4930538D17 45.7 38.2 -0.22
RIKEN cDNA 5730455O13 37.4 40.6 0.14
  1. *Significant correlation of transcript levels with subcutaneous fat mass (p < 0.05). The two genes that solely contributed to the significant LOD score of the fatty-acid metabolism and γ-hexachlorocyclohexane degredation principal components to chromosome 19 (see text for details).