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Table 4 Factor analysis for putative targets of miRNAs

From: Identification of co-regulated transcripts affecting male body size in Drosophila

 

Factor 1

Factor 2

Factor 3

Factor 4

 

Name

Load

p 1

Name

Load

p 1

Name

Load

p 1

Name

Load

p 1

1

kel

-0.90

0.05

CG5805

-0.92

0.04

CG7995

0.89

0.01

tws

0.80

0.06

2

CG6327

0.89

0.18

Cirl

0.89

0.23

CG4710

0.89

0.07

CG3689

0.78

0.14

3

CG18812

0.88

0.00

CG9245

0.82

0.05

CG4851

0.87

0.19

CG3811

0.77

0.11

4

Cyp314a1

-0.88

0.06

l(2)03709

0.82

0.13

Rpn6

0.87

0.12

CG11883

0.77

0.03

5

Gclc

0.87

0.01

Eh

0.82

0.12

up

-0.84

0.24

CG10809

0.74

0.34

6

sima

0.86

0.11

fz

0.81

0.13

Pkc98E

0.82

0.42

CG11128

0.74

0.17

7

CG9924

0.85

0.17

CG6330

0.80

0.11

CSN4

0.80

0.01

CG3961

0.72

0.15

8

CrebA

0.84

0.00

Atpalpha

0.79

0.38

cpo

0.72

0.41

CG5087

0.72

0.06

9

Mbs

-0.84

0.04

Surf4

0.79

0.29

drongo

0.72

0.12

unc-13

-0.70

0.07

10

fax

0.79

0.03

sano

0.79

0.02

fng

0.71

0.56

CG12424

0.70

0.16

11

RhoGEF2

0.78

0.11

CG12424

-0.78

0.40

G-oalpha47A

0.70

0.05

CG13344

0.70

0.03

12

CG9664

-0.78

0.34

CG4911

0.78

0.48

PFgn0025879

0.69

0.26

Sap47

0.69

0.05

13

CG2991

0.77

0.12

JhI-21

-0.77

0.34

Cka

-0.69

0.12

CG6325

0.69

0.29

14

CG8602

-0.76

0.04

CG9339

0.77

0.09

Ptp99A

0.68

0.07

CG8475

0.68

0.09

15

BicD

0.76

0.07

CG18604

0.76

0.02

cenG1A

0.67

0.22

CG5625

0.67

0.04

16

CG8954

0.76

0.29

G-oalpha47A

-0.76

0.02

Ef1gamma

0.67

0.18

PFgn0025879

0.67

0.26

17

dock

0.75

0.08

CG11266

0.76

0.06

CG4452

0.67

0.03

CG5039

0.67

0.01

18

CG10077

0.75

0.03

CG15628

0.75

0.11

CG3764

0.66

0.05

CG3534

-0.67

0.14

19

CG9381

-0.73

0.33

AP-47

0.73

0.15

CG5853

0.66

0.00

Pkc53E

0.65

0.15

20

Mbs

0.72

0.11

CG14762

0.73

0.05

ed

0.65

0.07

CG17646

0.65

0.13

21

BG:DS04929.1

0.71

0.03

CG4963

0.73

0.11

trx

0.65

0.26

CG11178

0.64

0.07

22

bon

0.70

0.11

Eip71CD

0.68

0.09

Cyp18a1

0.64

0.17

CG1814

-0.63

0.00

23

CG9413

0.70

0.60

CG7956

0.67

0.11

SoxN

0.63

0.03

CG14989

0.62

0.07

24

CG6282

-0.69

0.16

ple

0.66

0.17

eIF-5A

0.63

0.23

Sh

0.61

0.11

25

puc

0.69

0.01

CG9297

0.66

0.03

Atpalpha

0.63

0.02

CG9828

0.59

0.20

26

Mkp3

0.68

0.09

CG11198

0.66

0.01

Dr

0.62

0.19

pdm2

-0.58

0.20

27

CG4841

0.68

0.19

Cyp49a1

0.65

0.00

CG3961

0.62

0.15

CG6803

0.58

0.01

28

CG5886

0.67

0.05

gish

0.65

0.04

lack

0.61

0.08

Ptp99A

-0.56

0.07

29

CG9934

0.67

0.42

wdp

-0.65

0.01

G-oalpha47A

-0.61

0.02

Abd-B

0.55

0.06

30

Rab6

0.66

0.09

Pdi

0.65

0.14

CG16971

0.60

0.17

ana

0.55

0.03

31

CG7492

-0.65

0.29

sdk

0.63

0.34

Cdk4

0.60

0.21

CG6199

-0.54

0.26

32

CanA-14F

0.65

0.01

CG4484

-0.63

0.23

CG18854

0.60

0.06

Nmda1

0.54

0.34

33

CG10338

-0.65

0.03

nmdyn-D7

0.62

0.08

aop

0.60

0.01

CG9265

-0.53

0.13

34

CG8617

-0.65

0.22

scrt

-0.61

0.17

tws

0.59

0.00

CG10494

0.51

0.26

35

CG6064

0.64

0.01

mys

-0.61

0.11

wdp

0.58

0.01

CG9638

0.50

0.05

36

fkh

0.64

0.13

CG11537

0.61

0.33

CG1441

0.57

0.33

RhoGAPp190

0.50

0.00

37

Cka

0.64

0.12

CG8104

0.60

0.07

Cyp49a1

-0.57

0.18

CG4452

0.48

0.03

38

Mkp3

0.62

0.01

Mbs

0.60

0.11

CG17646

0.57

0.02

CG6554

-0.47

0.38

39

trx

0.62

0.26

CG5853

-0.60

0.00

CG4841

0.57

0.19

CG18375

-0.46

0.00

40

CG13586

0.62

0.25

tsl

0.59

0.00

CrebA

0.55

0.10

woc

0.45

0.32

41

amon

-0.61

0.21

UbcD2

0.58

0.21

Ef1alpha100E

0.54

0.08

CG8791

0.45

0.03

42

osp

0.60

0.01

ytr

0.58

0.02

Hr39

0.52

0.21

BicD

-0.45

0.07

43

Trn

0.60

0.02

G-oalpha47A

0.58

0.05

woc

-0.50

0.32

dco

0.44

0.02

44

CG7283

0.60

0.00

CG3800

0.56

0.52

vri

0.50

0.00

amon

0.44

0.21

45

Eip93F

0.59

0.06

Tsf2

0.56

0.21

CG16953

-0.50

0.10

CG1441

-0.44

0.33

46

CrebA

0.59

0.10

BcDNA:LD23587

0.56

0.20

dco

-0.49

0.02

CG9297

-0.43

0.03

47

Ptp4E

0.59

0.79

Nmda1

-0.54

0.34

puc

0.49

0.01

CG13586

-0.43

0.25

48

BcDNA:LD32788

0.58

0.13

Ubc-E2H

-0.53

0.00

CG8475

0.48

0.09

CG9664

-0.42

0.34

49

Hr39

0.56

0.21

Ac3

0.52

0.23

CG8602

0.48

0.04

scrt

0.41

0.17

50

ed

0.56

0.07

CG15658

-0.51

0.10

CG12424

-0.47

0.16

Cf2

0.41

0.47

51

CG11099

0.56

0.05

bon

0.50

0.11

Asph

0.47

0.02

insc

0.41

0.14

52

sdk

-0.56

0.34

sbb

0.49

0.10

BcDNA:LD32788

0.46

0.13

CG4484

0.40

0.23

53

cenG1A

0.55

0.22

SoxN

-0.49

0.03

Cf2

-0.46

0.47

Tsf2

0.40

0.21

54

Vha16

0.54

0.01

aop

-0.48

0.01

CG9638

0.46

0.05

   

55

BcDNA:LD23587

0.54

0.20

CG3764

0.47

0.05

CG14762

-0.46

0.05

   

56

CG18604

0.54

0.02

CanA-14F

0.47

0.01

CG11266

0.45

0.06

   

57

Trn

0.52

0.07

CG16953

0.47

0.10

Eip93F

-0.44

0.06

   

58

CG15236

-0.52

0.06

CG15236

-0.47

0.06

CG9413

0.44

0.60

   

59

fng

0.52

0.56

Trn

0.45

0.02

Abd-B

0.44

0.06

   

60

did

-0.51

0.18

Cka

-0.45

0.12

CG6707

0.43

0.75

   

61

CG11537

0.51

0.33

Ptp4E

0.44

0.79

BcDNA:LD21720

-0.43

0.12

   

62

CG10494

-0.51

0.26

BG:DS04929.1

0.44

0.03

Cyp49a1

-0.43

0.00

   

63

CG3534

-0.50

0.14

CG18854

0.44

0.06

CG8791

-0.42

0.03

   

64

pdm2

-0.50

0.20

vri

-0.44

0.00

Sh

-0.42

0.11

   

65

CG8451

-0.50

0.06

CG9924

-0.43

0.17

CG15658

0.42

0.10

   

66

Eip71CD

-0.49

0.09

dco

0.43

0.02

l(2)03709

0.41

0.13

   

67

gish

0.49

0.04

lack

0.43

0.08

CG6803

0.41

0.01

   

68

Aef1

-0.49

0.11

CG8791

-0.43

0.03

CG15628

0.41

0.11

   

69

GLaz

0.48

0.11

CG9664

0.43

0.34

Cyp310a1

-0.41

0.00

   

70

dco

0.47

0.02

CG5087

-0.43

0.06

BicD

-0.41

0.07

   

71

sbb

0.45

0.10

CG14989

-0.42

0.07

tsl

-0.41

0.00

   

72

BcDNA:LD21720

0.45

0.12

CG6064

0.42

0.01

CG7283

0.40

0.00

   

73

CG1814

0.44

0.00

CG18375

0.42

0.00

      

74

CG6199

0.43

0.26

ATPCL

0.41

0.00

      

75

CG4851

-0.42

0.19

puc

-0.41

0.01

      

76

CG16971

0.41

0.17

CG9638

-0.41

0.05

      

77

Sap47

0.40

0.05

CG6707

0.41

0.75

      

78

M(2)21AB

0.40

0.17

CG17646

-0.41

0.02

      

79

CG4452

0.40

0.03

Atet

0.40

0.08

      

80

   

Cf2

-0.40

0.47

      
  1. Factor analysis for putative targets of miRNAs. There were 203 candidate genes and a four-factor model was fit. The genes that loaded with a value greater than 0.40 are listed here. For each factor, the first column is the gene symbol name from [37] and the second column is the loading value for that gene. Genes are considered as loading 'significantly' if the absolute value of the loading value is ≥ 0.40. Genes are considered as loading 'high' if the absolute value of loading value is ≥ 0.70. The third column for each factor is the the P-value for the individual gene expression value regression on male body size (p1).