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Table 7 The combined numbers of polymorphisms and the mutation rates in the promoters, ORFs and exons of seven genes showing high variation in expression

From: Contribution of transcriptional regulation to natural variations in Arabidopsis

Accession ID/polymophisms Description Promoter ORF Exon Promoter ORF Exon
   Five accessions All accessions
At1g28210 Mitochondrial protein (AtJ1), putative 33 23 4 43 32 4
At2g32930 CCCH Zn-finger protein 1 2 0 1 3 1
At2g34290 Putative protein kinase 1 11 11 10 21 21
At3g13445 Transcription initiation factor TFIID-1 (TATA sequence-binding protein 1) 7 2 0 9 3 3
At4g10160 Putative RING Zn-finger protein 7 46 15 16 57 20
At4g39410 WRKY family transcription factor 3 12 0 6 12 6
At2g18790 Phytochrome B (PHYB) photoreceptor 9 10 7 21 82 71
Total number   61 106 37 106 210 126
Rate per kb   8.06 6.11 4.08 14.00 12.10 13.90