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Table 6 siRNA matches of NAT pairs

From: Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

Category of NAT pairs

Gene ID

Strand

Overlap length (nucleotides)

Description

Genomic-NAT

At2g06510

+

506

Replication protein, putative

 

At2g06520

-

 

Membrane protein, putative

 

At4g35850

+

360

Pentatricopeptide (PPR) repeat-containing protein

 

At4g35860

-

 

Ras-related GTP-binding protein, putative

 

At5g20720

+

294

Chaperonin, chloroplast

 

At5g20730

-

 

Auxin-responsive factor

 

At5g41680

+

587

Protein kinase family protein

 

At5g41685

-

 

Mitochondrial import receptor subunit TOM7

 

At5g48870

+

118

Small nuclear ribonucleoprotein, putative

 

At5g48880

-

 

Acetyl-CoA C-acyltransferase 1

cDNA-NAT

RAFL19-56-G17

+

1,209

No coding potential

 

RAFL09-70-E21

-

 

Expressed protein

 

At#S18901030

+

52

Putative transcription factor

 

At#S18898439

-

 

Pentatricopeptide (PPR) repeat containing protein

 

At#S18900150

+

884

No coding potential

 

At#S18898471

-

 

expressed protein

 

At#S18912025

+

1,149

No coding potential

 

At#S18898946

-

 

TCP family transcription factor

Genomic-cDNA-NAT

At1g07725

+

1,640

Exocyst subunit EXO70 family protein

 

At#S18898556

-

 

No coding potential

 

At2g16587

+

379

expressed protein

 

RAFL19-48-E15

-

 

No coding potential