Comparative context analysis of codon pairs on an ORFeome scale

Table 5 A hypothetical r × c contingency table

The table illustrates how contingency tables were constructed and how the statistical methodologies described in methods were implemented. One set of categories is represented by rows, the other by columns. In the present case, if the 3' context is being analyzed by Anaconda the rows of the table (A) correspond to the 5' codons and the columns (B) to the 3' codons of each pair.

ISSN: 1474-760X