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Table 1 The 3' codon context of CUG

From: Comparative context analysis of codon pairs on an ORFeome scale

3' Codon Residual 3' Codon Residual 3' Codon Residual 3' Codon Residual
AAA 7.436 ACG 0.644 UCU -10.007 CCA -2.438
AAG 1.927 CGU -1.809 CUU 1.167 CCG 2.895
AAU 0.397 CGC 2.981 CUC 2.18 CAU 2.026
AAC 2.037 CGA 8.258 CUA 5.258 CAC 2.642
ACU -6.947 CGG 5.404 CUG 6.774 CAA 4.049
ACC -5.239 ACG -4.726 CCU -1.769 CAG 7.105
ACA -5.12 AGG -0.666 CCC 8.894 UAA 0.22
  1. Positive values indicate that the 3' codons appear in the genome more times than expected (good context) while negative values indicate that the 3' codons appear fewer times than expected assuming a random distribution (bad context). Residual values give a quantitative indication of the context bias, where values falling within the -3 to +3 interval are not statistically significant (no bias). See also Figure 2.