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Figure 7 | Genome Biology

Figure 7

From: Comparative context analysis of codon pairs on an ORFeome scale

Figure 7

Codon context maps are species specific. Comparison of the genomic codon context maps of S. cerevisiae, C. albicans, S. pombe and E. coli shows that they are all different. There are common features between the maps but differences are clearly visible, indicating that each species has a specific set of codon context rules. Among the common features, the green diagonal line in the yeast maps is the most relevant. This diagonal indicates that almost all codons prefer themselves as their 3' neighbors and is strongly marked in the C. albicans context map, suggesting that in this species, tandem codon repetition is very common.

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