Identification of ciliated sensory neuron-expressed genes in Caenorhabditis elegans using targeted pull-down of poly(A) tails

Table 1 Expression patterns of the top-ranked genes

Rank	Clone	Gene	Locus	Expression pattern
1	yk380a6	R102.2		ADF, ADL, ASH, ASI, ASJ, ASK, PHA, PHB
2	yk305a7	C33A12.4		ADF, ADL, ASE, ASH, ASI, ASJ, ASK, AVJ, AWA, AWB, PHA, PHB, labial neurons
3	yk139b4	C34D4.1		ADL, ASH, ASI, ASJ, ASK, PHA
4	yk534e12
5	yk91d12	C02H7.1		ADF, ADL, AFD, ASG, ASH, ASI, ASJ, ASK, AWB, PHA, PHB, URX
6	yk261h1	Y43F8C.4
7	yk538c3	K07C11.10		ADF, ADL, ASE, ASG, ASH, ASI, ASJ, ASK, AWA, AWB, AWC, PHA, PHB
8	yk561g1	F40H3.6
9	yk267a7	ZK938.2		ADL, ASE, ASG, ASH, ASI, ASJ, ASK, AWB, AWC, PHB, URX
10	yk509b4	Y55D5A.1a		ADF, ADL, AFD, ASE, ASG, ASH, ASI, ASJ, ASK, AWA, AWB, AWC, BAG, PHA, PHB, URX, intestine
11	yk609e11	T27E4.3	hsp-16.48
12	yk561g1	F40H3.6
13	yk341h9	F53A9.4		ADL, ASE, ASH, ASI, ASJ, ASK, AWC, PHA, PHB, labial neurons
14	yk604g4	C35E7.11		Intestine, RMF, RMH
15	yk467b4	M28.7		ADF, ADL, AFD, ASE, ASG, ASH, ASI, ASJ, ASK, AWA, AWB, AWC, PHA, PHB, URX, labial neurons
16	yk284g4	K10D6.2a		ADL, ASE, ASI, ASJ, ASK, PHB, URX, labial neurons, seam cells, hypodermis
17	yk610e5	Y9D1A.1
18	yk295d7	K07B1.8		No GFP
19	yk252h2	C29H12.3a	rgs-3
20	yk225f3	C27A7.4	che-11
21	yk488h9	C13B9.1		No GFP
22	yk373g4	T07C5.1c		AFD, ASG, AUA, PVQ, intestine
23	yk305c8	F10G2.1		Coelomocytes
24	yk450c2	K10G6.4		ADF, ADL, AFD, ASE, ASG, ASH, ASI, ASJ, ASK, AVA, AVD, AWA, AWB, AWC, PHB, RMD, ventral nerve cord neurons, many other neurons
25	yk76f1	R13H4.1		ADF, ADL, ASE, ASG, ASH, ASI, ASJ, ASK, PHA, PHB, URX, labial neurons

The expression patterns of the genes indicated in bold were examined. Only the cells and tissues in which GFP expression was consistently observed are listed. It is therefore possible that the genes are weakly expressed in cells or tissues other than those listed here. Cells and cell groups in bold are ciliated sensory neurons.

ISSN: 1474-760X