Table 3 DNA-repair genes missing only in P. marinus MED4 or in both MED4 and SS120
From: Accelerated evolution associated with genome reduction in a free-living prokaryote
Gene | COG | Product | MED4 | SS120 | MIT9313 | WH8102 |
|---|---|---|---|---|---|---|
ada/ogt | 0350 | 6-O-methylguanine-DNA methyltransferase | - | - | PMT0269 | SYNW1680 |
mutY | 1194 | A/G-specific DNA glycosylase | - | Pro1789 | PMT0135 | SYNW0115 |
recQ | 0514 | Superfamily II DNA helicase | - | - | PMT0189 | SYNW1958 |
recJ | 0608 | Single-stranded DNA-specific exonuclease | - | Pro0984 | PMT0761 | SYNW1206 |
exoI/xseA | 1570 | Exonuclease VII large subunit | - | Pro0111 | PMT1641 | SYNW2181 |
xseB | 1722 | Exonuclease VII small subunit | - | Pro0112 | PMT1642 | SYNW2182 |
- | 0494 | NUDIX hydrolase family | - | - | PMT1026 | SYNW1334 |