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Table 2 Probes and barcode sequences

From: A low-cost open-source SNP genotyping platform for association mapping applications

Probe number

Probe/barcode a

Probe/barcode b

01

ATATTCTGAGACACGCCGCG

ATACGCGATGGGATCAGACT

02

ATGCGACTCTTGACGAACGT

TTCGAGCGTCTGGCACACTT

03

GTCACTCGTGTCCAGGATGT

TATCGCGTGTCAGTGCTTGT

04

GATACCGGACCATGTTTCGC

GATGTTCGTCCATGCGACCT

05

TGATCCGCGTCGATGCTCTT

GCAGTCACGTTCTCGAATCG

06

TTTAGCCGGATCACCGTGTG

ATATGTGCAGAACCCGCGAC

07

AGAGAGACGTTGCCCAAGTC

GATGCGATACCCTGCGATCT

08

ATTTAGCGTGCAGCCGACCT

ATGCGTGGTGTCCGATCATA

09

TAAGGGTTACGAACATCGCC

TGGACTCTCATAACGGCGTC

10

GCAGCTCGTCACAGGTATTG

TACCGGATTACAGCTCGTGG

11

AGCTAATGTCGAGTCACGCT

TCTACACGAGAACGAGGCAC

12

AGCGCGACGTTGATCCAGAT

AATGAACGAGACCGCGTGAC

13

TCGGACTCGTGACGCTATTT

ATGAGAGTTCGATGACCTGT

14

ACGCACTGACGATCATTCGG

TTCGACCCGGACGACTGTAT

15

TATAGCCGTGAACCCGATGC

TAAAGCACAGTCCGTAATCT

16

ATCATGTCCCAAGCGCGGTA

AAGCCGATGTCGATCTACCT

  1. All 20 nucleotide probe sequences are given in the 5' to 3' direction. The 16 nucleotide barcode sequences incorporated into the upstream oligonucleotide ligation assay oligos are the reverse complement of the underlined portion.