Table 2 Gene Ontology annotation of P. euphratica unigene sequences
From: Gene expression and metabolite profiling of Populus euphratica growing in the Negev desert
GO term | GO | Number of sequences |
|---|---|---|
biological_process | GO:0008150 | 2,141 |
   behavior | GO:0007610 | 48 |
   cellular process | GO:0009987 | 681 |
   cell communication | GO:0007154 | 167 |
cell-cell signaling | GO:0007267 | 1 |
response to extracellular stimulus | GO:0009991 | 11 |
signal transduction | GO:0007165 | 150 |
   cell death | GO:0008219 | 33 |
   cell differentiation | GO:0030154 | 87 |
   cell growth and/or maintenance | GO:0008151 | 546 |
cell cycle | GO:0007049 | 83 |
cell growth | GO:0016049 | 5 |
cell organization and biogenesis | GO:0016043 | 157 |
cell homeostasis | GO:0019725 | 25 |
transport | GO:0006810 | 397 |
   development | GO:0007275 | 211 |
   cell differentiation | GO:0030154 | 87 |
   embryonic development | GO:0009790 | 1 |
flower development | GO:0009908 | 12 |
   morphogenesis | GO:0009653 | 96 |
   regulation of gene expression, epigenetic | GO:0040029 | 11 |
   reproduction | GO:0000003 | 60 |
   ripening | GO:0009835 | 29 |
   physiological process | GO:0007582 | 2,096 |
   photosynthesis | GO:0015979 | 74 |
   response to stress | GO:0006950 | 270 |
   response to endogenous stimulus | GO:0009719 | 84 |
   response to external stimulus | GO:0009605 | 229 |
response to abiotic stimulus | GO:0009628 | 69 |
response to biotic stimulus | GO:0009607 | 199 |
   metabolism | GO:0008152 | 1,758 |
amino acid and derivative metabolism | GO:0006519 | 123 |
biosynthesis | GO:0009058 | 512 |
carbohydrate metabolism | GO:0005975 | 255 |
catabolism | GO:0009056 | 317 |
electron transport | GO:0006118 | 247 |
energy pathways | GO:0006091 | 154 |
lipid metabolism | GO:0006629 | 125 |
nucleobase\, nucleoside\, nucleotide and nucleic acid metabolism | GO:0006139 | 367 |
DNA metabolism | GO:0006259 | 123 |
transcription | GO:0006350 | 36 |
protein metabolism | GO:0019538 | 757 |
protein biosynthesis | GO:0006412 | 252 |
protein modification | GO:0006464 | 222 |
cellular_component | GO:0005575 | 33 |
   cell | GO:0005623 | 7 |
   external encapsulating structure | GO:0030312 | 4 |
cell wall | GO:0005618 | 45 |
   intracellular | GO:0005622 | 234 |
cytoplasm | GO:0005737 | 386 |
cytoskeleton | GO:0005856 | 28 |
cytosol | GO:0005829 | 101 |
endoplasmic reticulum | GO:0005783 | 152 |
endosome | GO:0005768 | 15 |
Golgi apparatus | GO:0005794 | 60 |
lysosome | GO:0005764 | 36 |
mitochondrion | GO:0005739 | 236 |
peroxisome | GO:0005777 | 39 |
plastid | GO:0009536 | 387 |
ribosome | GO:0005840 | 173 |
vacuole | GO:0005773 | 47 |
nucleus | GO:0005634 | 494 |
nuclear membrane | GO:0005635 | 7 |
nucleolus | GO:0005730 | 25 |
nucleoplasm | GO:0005654 | 6 |
thylakoid | GO:0009579 | 78 |
   membrane | GO:0016020 | 436 |
plasma membrane | GO:0005886 | 59 |
   extracellular | GO:0005576 | 15 |
   extracellular matrix | GO:0005578 | 6 |
   extracellular space | GO:0005615 | 8 |
   unlocalized | GO:0005941 | 11 |
molecular_function | GO:0003674 | 2,391 |
   chaperone activity | GO:0003754 | 78 |
   catalytic activity | GO:0003824 | 1,424 |
   hydrolase | GO:0016787 | 440 |
   kinase | GO:0016301 | 199 |
   transferase | GO:0016740 | 427 |
   enzyme regulator activity | GO:0030234 | 38 |
   binding | GO:0005488 | 1,278 |
   carbohydrate binding | GO:0030246 | 1 |
   lipid binding | GO:0008289 | 22 |
   nucleic acid binding | GO:0003676 | 540 |
DNA binding | GO:0003677 | 245 |
chromatin binding | GO:0003682 | 8 |
transcription factor activity | GO:0003700 | 63 |
nuclease activity | GO:0004518 | 20 |
RNA binding | GO:0003723 | 216 |
translation factor activity, nucleic acid binding | GO:0008135 | 58 |
   nucleotide binding | GO:0000166 | 482 |
   oxygen binding | GO:0019825 | 1 |
   protein binding | GO:0005515 | 220 |
   molecular_function unknown | GO:0005554 | 84 |
   motor activity | GO:0003774 | 17 |
   signal transducer activity | GO:0004871 | 101 |
   receptor binding | GO:0005102 | 4 |
   receptor activity | GO:0004872 | 61 |
   structural molecule activity | GO:0005198 | 232 |
   transcription regulator activity | GO:0030528 | 102 |
   translation regulator activity | GO:0045182 | 58 |
   transporter activity | GO:0005215 | 332 |