Figure 3From: Chipper: discovering transcription-factor targets from chromatin immunoprecipitation microarrays using variance stabilizationAgreement between predicted and empirical false-discovery rate for Sko1. The broken curve shows q values computed from the ranked list of p values, using QVALUE software [32]. The solid curve shows the false-discovery rate (FDR) computed using only targeted chromatin immunoprecipitation experiments (35 targets).Back to article page