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Table 6 Gene families identified that are either involved in cell-cycle control or developmental processes

From: An Ambystoma mexicanumEST sequencing project: analysis of 17,352 expressed sequence tags from embryonic and regenerating blastema cDNA libraries

Cellular process

Putative ID of contig

Contig

Expression

Cell cycle

Cyclin A2

Am_20

BL unique

 

Cyclin B1

Am_1031

BL 3x

 

Cyclin B2

Am_4185

NT unique

 

Cyclin B3

Am_3173

BL unique

 

Cyclin E1

Am_38

BL unique

 

Cyclin E2

Am_91

BL unique

 

Cdk4

Am_3891

BL unique

 

Polo kinase

Am_1717

BL unique

 

Cdc25A

Am_3678

BL unique

 

p27/Kip1

Am_4671

NT unique

 

Cdc20

Am_2213

BL unique

 

Cdh1

Am_1148

BL unique

Development

Wnt8

Am_384

BL unique

 

Wnt5

Am_642

BL unique

 

FGFR4a

Am_1393

BL unique

 

Sonic hedgehog

Am_3741

BL unique

 

Activin receptor type II

Am_3590

BL unique

 

TGF-β

Am_4990

NT unique

 

BMP-1

Am_4639

NT unique

 

Cdx1

Am_875

BL unique

 

Cdx2

Am_387

BL unique

 

HoxA2

Am_2387

BL unique

 

HoxB13

Am_4865

NT unique

 

HoxC4

Am_3998

BL unique

 

HoxC8

Am_2910

BL unique

 

Pax6

Am_2945

BL unique

 

Smad5

Am_1420

BL unique

 

Smad8

Am_4665

NT unique

 

Retinoblastoma binding protein 2

Am_2723

BL unique

 

Beta-catenin

Am_699

BL 3x

 

Zic5

Am_2068

BL unique

 

Frizzled 2

Am_3243

BL unique

 

Frizzled 5

Am_3451

BL unique

 

Frizzled 7

Am_2334

BL unique

 

TRIP12

Am_6416

NT unique

  1. The identifier of the A. mexicanum contig is given in the third column. The expression pattern as determined by in silico differential display is shown in column 4.