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Table 2 Prediction of subcellular localization and transmembrane helices

From: Phylogenetic profiling of the Arabidopsis thalianaproteome: what proteins distinguish plants from other organisms?

TargetP predictions

Ā Ā Ā 
Ā 

Unknown plant-specific proteins

Known plant-specific proteins

Whole Arabidopsis protein set

Any other location

1,073 (53%)

1,006 (55%)

15,706 (58%)

Chloroplast

360 (18%)

253 (14%)

3,972 (15%)

Mitochondria

254 (13%)

178 (10%)

2,963 (11%)

Secretory pathway

330 (16%)

394 (22%)

4,647 (17%)

TMHMM predictions

Ā Ā Ā 

Membrane associated

220 (11%)

89 (5%)

2,075 (8%)

Total

2,017

1,831

27,288

  1. Total number of protein sequences per category (percentage relative to the total in the group).