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Table 8 Co-linkage analysis of genes with gene-centric vocabularies

From: TXTGate: profiling gene groups with text-based information

Gene name Description
hnpcc Hereditary nonpolyposis colon cancer
apc Adenomatous polyposis coli protein
p53 Cellular tumor antigen P53 (tumor suppressor P53)
mlh1 DNA mismatch repair protein MLH1 (mutL protein homolog 1)
muts E. coli mismatch repair gene mutS
p21 Cyclin-dependent kinase inhibitor 1A
msh2 DNA mismatch repair protein MSH2 (mutS protein homolog 2)
bax BAX protein, cytoplasmic isoform delta
wnt Wingless-type MMTV integration site family members
pms2 DNA mismatch repair protein PMS2
src Proto-oncogene tyrosine protein kinase SRC
dcc Tumor suppressor protein DCC precursor (colorectal cancer suppressor)
mcc Colorectal mutant cancer protein MCC
braf Proto-oncogene serine/threonine protein kinase B-RAF
fgfr3 Fibroblast growth factor receptor 3 precursor
hcc Hepatocellular carcinoma
dra Chloride anion exchanger DRA
axin2 AXIS inhibition protein 2
pms1 DNA mismatch repair protein PMS1
abl Abelson murine leukemia viral oncogene homolog 1
bub1 Mitotic checkpoint serine/threonine protein kinase BUB1
ptp Protein tyrosine phosphatase family
bcl10 B cell lymphoma/leukemia 10
ptp_pest Protein tyrosine phosphatase family with C-terminal PEST-motif
prlts PDGF-receptor beta-like tumor suppressor
  1. This table shows the top-25 colinked gene symbols in the pool of abstracts of the colon and colorectal cancer case. Genes that were not in the query list are indicated in bold.