Table 1 Analysis of transcripts represented in conventional and oligo-capped cDNA libraries
Conventional cDNA libraries | Oligo-capped cDNA library | |
|---|---|---|
Total sequences providing peptide predictions | 734 | 500 |
In-frame ATG followed by ≥ 99-nucleotide open reading frame (ORF) | 567 (77.2%) | 430 (86.0%) |
Predicted ORF length (average) | 114.6 | 101.5 |
% Signal peptide or signal anchor | SP: 74 (10.1%) | SP: 102 (20.4%) |
SA: 16 (2.2%) | SA: 5 (1.0%) | |
% Spliced leader | 0 | 37 (7.4%) |