From: Versatile and open software for comparing large genomes
Reference genome | Query genome | MUMmer 2.1 | MUMmer 3.0 | ||||
Species | Size (Mbp) | Species | Size (Mbp) | Time (sec) | Space (MB) | Time (sec) | Space (MB) |
E. coli K12 | 4.6 | E. coli O157:H7 | 5.5 | 18 | 102 | 17 | 77 |
A. fumigatus | 28.0 | A. nidulans | 30.1 | 128 | 578 | 120 | 459 |
Saccharomyces cerevisiae | 13.0 | Schizosaccharomyces pombe | 13.8 | 51 | 261 | 47 | 204 |
D. melanogaster (chromosome 2L) | 22.2 | D. pseudoobscura (all chromosomes) | 150.0 | 546 | 684 | 520 | 485 |
Homo sapiens (chromosome 21) | 44.7 | Mus musculus (chromosome 16) | 99.2 | - | - | 430 | 759 |