Table 4 Number of genes in the metabolism primary and secondary funcats in each InterAct class that are regulated by light only, carbon only and light and/or carbon
From: Genome-wide investigation of light and carbon signaling interactions in Arabidopsis
| Â | Â | Â | Â | Â | Â | Â | L+C interactions | |||||||||
| Â | Total | No effect | C-only | L-only | Model 1-independent | Model 2-dependent | Model 3-dependent and independent | |||||||||
| Â | Â | Â | I | R | I | R | I | R | A | I | R | C-dominates | L-dominates | EE | S | E |
Total | 1,898 | 440 | 135 | 56 | 62 | 12 | 91 | 242 | 53 | 19 | 13 | 223 | 166 | 124 | 218 | 45 |
Metabolism* | 274 | 45-S | 20 | 3 | 13 | 0 | 21+S | 30 | 5 | 4 | 1 | 51+S | 27 | 24 | 24 | 7 |
C-compound/ carbohydrate metabolism | 84 | 12-S | 5 | 1 | 4 | 0 | 6 | 8 | 2 | 1 | 0 | 17+S | 8 | 10+S | 9 | 1 |
Amino-acid metabolism | 44 | 2-S | 4 | 1 | 4 | 0 | 3 | 7 | 1 | 0 | 0 | 12+S | 4 | 2 | 3 | 1 |
Lipid, fatty-acid, isoprenoid, metabolism | 40 | 9 | 2 | 0 | 0 | 0 | 7+S | 5 | 0 | 2 | 0 | 5 | 5 | 3 | 2 | 0 |
Metabolism of vitamins, co-factors, prosthetic groups | 20 | 8 | 1 | 1 | 3+S | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 2 | 0 |
Nitrogen, sulfur metabolism | 13 | 2 | 2 | 0 | 2+S | 0 | 2+S | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 0 | 2+S |