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Table 1 Examples of class relevance evaluation

From: GOToolBox: functional analysis of gene datasets based on Gene Ontology

Original class annotations Most relevant term among class annotations Associated probability Number of proteins in the class Number of class proteins annotated for the term Number of proteins annotated for the term in the reference set
Conjugation with cellular fusion; perception of abiotic stimulus; cell surface receptor linked signal transduction; sensory perception; response to pheromone during conjugation with cellular fusion Conjugation with cellular fusion 3.85E-09 11 8 32
RNA metabolism RNA metabolism 2.76E-09 32 17 70
Cell cycle Cell cycle 0.07383 6 3 115
  1. The second and third columns are the results of the GO-Stats program, whereas all other columns are the results of a PRODISTIN analysis (see text for details).