Table 3 List of complexes significantly represented in the phylogenetically distinct module cores
From: How biologically relevant are interaction-based modules in protein networks?
Function | Cores (rcc ≥ 5) | Complexes |
|---|---|---|
Cell fate | 6 (2) | Actin-associated motor protein, 431 |
Energy | 4 (2) | 47, 346, Serine/threonine phosphoprotein phosphatase |
Metabolism | 9 (3) | 521, GGTase II, OT |
Cellular transport | 2 (2) | Class C Vps, 239, 77, AP-3, AP-2 |
Cell cycle | 7 (4) | Tubulins, CA, AP, 3, OR, SCF-GRR1, SCF-CDC4, RI |
Protein fate | 10 (5) | Vps, Class C Vps, 71, 77, FT, GGTase I, 168, 651, OT, AP, 23 |
Transport facilitation | 1 (1) | TOM |
Cell environment | 4 (3) | STE5-MAPK, Kel1p/Kel2p, 521 |
Protein synthesis | 5 (2) | elF3, elF2B, elF2, 340, 339, 613 |
Cell rescue | 3 (3) | No complexes |
Signaling | 2 (1) | 167, 308, 521 |
Cell organization | 9 (6) | 272, 5, 71, 289, casein kinase II, 181, 167, Gim |
Transcription | 9 (6) | 154, RM, RP, Ma, Cbf, Mb, 126, NSP1, TF, 178, CPK, 634, 160, CF |