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Figure 2 | Genome Biology

Figure 2

From: Genomic neighborhoods for Arabidopsisretrotransposons: a role for targeted integration in the distribution of the Metaviridae

Figure 2

Arabidopsis thaliana Metaviridae and Pseudoviridae reverse transcriptase diversity. Phylogenetic trees used in this figure are adapted from [14,18]. Each tree is based on ClustalX [56] alignments of reverse transcriptase domains for elements in a given family. Neighbor-joining trees (10,000 bootstrap repetitions) were generated using MEGA2 [57]. The non-LTR retrotransposon Ta11 served as the root for both trees. The three Metaviridae sublineages are boxed.

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Genome Biology

ISSN: 1474-760X

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