|
Gene categories
|
Sanger/PTI chromosome 20
|
Non-Sanger PTI chromosome 20
|
Sanger/PTI chromosome 22
|
Non-Sanger PTI chromosome 22
|
PTI genome-wide
|
|---|
|
Total Sanger genes represented
|
1,177 (826)
| |
854 (575)
| | |
|
RefSeq
|
676 (552)
|
8 (2)
|
375 (290)
|
12 (5)
|
10,720 (7992)
|
|
Ab initio + expressed sequence + protein
|
336 (229)
|
10 (2)
|
285 (202)
|
10 (5)
|
8,801 (4269)
|
|
Ab initio + expressed sequence
|
38 (17)
|
96 (8)
|
28 (15)
|
74 (8)
|
3,733 (784)
|
|
Ab initio + protein
|
28 (9)
|
37 (7)
|
31 (16)
|
29 (4)
|
1,983 (233)
|
|
Expressed sequence + protein
|
38 (2)
|
37 (2)
|
36 (10)
|
24 (4)
|
1,126 (271)
|
|
Expressed sequence
|
22 (3)
|
1,591 (44)
|
31 (3)
|
1,127 (33)
|
7,170 (1428)
|
|
Ab initio
|
22 (12)
|
674 (39)
|
50 (35)
|
362 (17)
|
16,822 (555)
|
|
Protein
|
17 (2)
|
157 (7)
|
18 (4)
|
121 (4)
|
540 (110)
|
|
High-confidence categories
|
1,116 (809)
|
188 (21)
|
755 (533)
|
149 (26)
|
26,363 (13,549)
|
|
All categories
|
1,177 (826)
|
2,610 (111)
|
854 (575)
|
1,759 (80)
|
50,895 (15,642)
|
- Columns 1 and 3 provide the total number of Sanger genes for each category for chromosomes 20 and 22, respectively, with the number of EVGs detected given in parentheses. Columns 2 and 4 provide the total number of LPs that did not overlap Sanger genes, with the number of EVGs detected given in parentheses. The last column provides the total number of LPs in the PTI represented on the PTA microarrays, with the number of EVGs detected over the entire genome given in parentheses.
