Table 2 Summary of expression-validated genes (EVGs) from predicted transcripts over the entire human genome
Gene categories | Sanger/PTI chromosome 20 | Non-Sanger PTI chromosome 20 | Sanger/PTI chromosome 22 | Non-Sanger PTI chromosome 22 | PTI genome-wide |
|---|---|---|---|---|---|
Total Sanger genes represented | 1,177 (826) | Â | 854 (575) | Â | Â |
RefSeq | 676 (552) | 8 (2) | 375 (290) | 12 (5) | 10,720 (7992) |
Ab initio + expressed sequence + protein | 336 (229) | 10 (2) | 285 (202) | 10 (5) | 8,801 (4269) |
Ab initio + expressed sequence | 38 (17) | 96 (8) | 28 (15) | 74 (8) | 3,733 (784) |
Ab initio + protein | 28 (9) | 37 (7) | 31 (16) | 29 (4) | 1,983 (233) |
Expressed sequence + protein | 38 (2) | 37 (2) | 36 (10) | 24 (4) | 1,126 (271) |
Expressed sequence | 22 (3) | 1,591 (44) | 31 (3) | 1,127 (33) | 7,170 (1428) |
Ab initio | 22 (12) | 674 (39) | 50 (35) | 362 (17) | 16,822 (555) |
Protein | 17 (2) | 157 (7) | 18 (4) | 121 (4) | 540 (110) |
High-confidence categories | 1,116 (809) | 188 (21) | 755 (533) | 149 (26) | 26,363 (13,549) |
All categories | 1,177 (826) | 2,610 (111) | 854 (575) | 1,759 (80) | 50,895 (15,642) |