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Table 1 List of charge imbalanced reactions used in iJR904

From: An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Abbreviation

Reaction

ADOCBLS

agdpcbi + rdmbzi → adocbl + gmp + h

AMPMS

air + h2o → 4ampm + (2) for + (4) h

BTS2

cys-L + dtbt ↔ ala-L + btn + (2) h

DHNAOT

dhna + octdp → 2dmmq8 + co2 + h + ppi

DKMPPD2

dkmpp + (3) h2o → 2kmb + for + (6) h + pi

MECDPDH

2mecdp + h → h2mb4p + h2o

  1. All of these reactions are elementally balanced but not charge balanced (see Additional data file for definition of metabolite abbreviations).
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