|  |  | Most significant word pair in consensus group | |||
---|---|---|---|---|---|---|
 | Conserved word pairs (compilation of overlapping words) | Known transcription factors or motifs | (χ2, p-value via Bonferroni) | Median of min distance | Number of TCRs | Expression conditions with significant gene subsets (FDR significance) |
1 | G[AC]GATGAG, TGAAAATTTT | PAC, RRPE | 240.6 (10-49) | 19±0.5 | 162 | Repressed in multiple environmental stresses (10-6) |
2 | ANTGAAA, GAAAAWT | RRPE (Overlap) | 96.9 (2 × 10-16) | 43±11 | 68 | Repressed in multiple environmental stresses (10-6) |
3 | CTCCCC, CCCTTA | Msn2/4p-like, (Overlap) | 53.8 (5 × 10-7) | 28±3.7 | 15 | Induced in multiple environmental stresses (10-6) |
4 | GGCGGGC, GTGGCA | Ume6p, Rpn4p | 43.7 (9 × 10-5) | 48±16 | 25 | Cadmium, diamide (10-4) MMS, heat shock (10-3) |
5 | CCTTTT, GAGAAA | Msn2/4p, Hsf1p | 56.2 (2 × 10-7) | 54±5.4 | 69 | Heat shock (10-4) |
6 | CCGCCG, ACCCCA | Ume6p, Mig1p | 41.9 (2 × 10-4) | 17±1.5 | 14 | Stationary phase (10-6) |
7 | CCGCGG, CGGAAA | Pdr1/3p, Unknown | 111 (2 × 10-19) | 44±12 | 21 | Diamide (10-3) |
8 | RACGCG, RCGAAA | Swi6p/Mbp1p, Swi4/6p, | 83.0 (7 × 10-13) | 33±5.0 | 33 | Cell cycle, G1 phase (10-6) |
9 | GCACGTGC, ACTGTGGC | Cbf1p | Pho4p, Met31/32p | 37.4 (2 × 10-3) | 22±2.5 | 22 | Cadmium (10-6) |
10 | T[AT]TTGTT, TGTTTAC | Fkh1/2p (Overlap) | 51.1 (2 × 10-6) | 57±6.9 | 48 | Cell cycle (10-3) |
11 | TTTGTT, TTTTTY | Fkh1/2p, T n C | 37.6 (2 × 10-3) | 49±4.4 | 267 | Late nitrogen depletion (10-3) |
12 | CCGATA, TCGTTT | Hap1p, Ecm22p | Upc2p | 36.2 (4 × 10-3) | 41±5.9 | 28 | Ergosterol inhibition (10-4) MMS (DNA damage) (10-3) |
13 | TCGTTT, TATTGTT | Rox1p, Ecm22p | Upc2p | 58.8 (4 × 10-8) | 55±0.5 | 69 | Early menadione (10-3) |
14 | TGACTC, TCTTTT | Gcn4, T n C | 35.6 | 59±9.1 | 63 | Amino-acid starvation (10-5) |