Skip to main content

Table 3 List of horizontal gene transfer candidates from M. incognita

From: Horizontally transferred genes in plant-parasitic nematodes: a high-throughput genomic approach

 

Best bacterial match

Best eukaryotic match*

Candidate

Name

% identity

Name

e-value, %identity

β1,4-endoglucanases

    

MI00537

Bacillus sp. KSM-N252

(2.7e-24, 40%)

Orpinomyces joyonii

(5.6e-10, 32%)

MI01011

Pseudomonas fluorescens

(2.5e-75, 47%)

Orpinomyces joyonii

(9.4e-41, 36%)

MI01381

Streptomyces coelicolor

(6.9e-13, 31%)

Orpinomyces joyonii

(0.013, 27%)

MI01842

Pseudomonas fluorescens

(1.2e-35, 44%)

None

 

Pectinases

    

MI00252

Ralstonia solanacearum

(8.8e-61, 50%)

Arabidopsis thaliana

(5.1e-7, 40%)

MI00592

Streptomyces coelicolor

(3.9e-12,31%)

Fusarium solani

(1.9e-7, 33%)

Rhizobial matches

    

NodL

Rhizobium leguminosarum

(8e-54, 58%)

Saccharomyces cerevisiae

(5e-38, 46%)

Glutamine synthetase

Mesorhizobium loti

(9e-45, 56%)

Blumeria graminis

(2e-15, 33%)

L-Threonine aldolase

Brucella melitensis

(1e-23, 48%)

Leishmania major

(0.096, 25%)

Unknown function

Sinorhizobium meliloti

(9e-45, 51%)

Caenorhabditis elegans

(3.9, 26%)

Unknown function

    

MI01406

Amycolatopsis mediterranei

(4.9e-28, 53%)

Arabidopsis thaliana

(2.5e-4, 33%)

MI00267

Amycolatopsis mediterranei

(3.0e-28, 58%)

Aspergillus fumigatus

(5.4e-6, 32%)

  1. The best bacterial and eukaryotic matches are listed with their e-values from a BLASTX search and percent identity as reported by BLAST. *Best match to any eukaryote other than a plant-parasitic nematode.