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Table 3 Reference mitochondrial control-region sequences obtained from EMBL database and used in the phylogenetic analysis

From: Ancient origin and evolution of the Indian wolf: evidence from mitochondrial DNA typing of wolves from Trans-Himalayan region and Pennisular India

Sample Code Species Subspecies Country/Conttinent EMBL AccNo D-loop (bp) Haplotypea Reference D-loop region sequenced
1-lu1 C. lupus lupus Yugosolavia Europe AB007372 672   [9] Complete 5'-CR-I
2-lu2 C. lupus lupus Yugosolavia Europe AB007373 672   [9] Complete 5'-CR-I
3-p1 C. lupus pallipes Afganisathan Asia AB007374 672   [9] Complete 5'-CR-I
4-ch1 C. lupus chanco Mongol, China Asia AB007375 673   [9] Complete 5'-CR-I
5-ch2 C. lupus chanco Mongol, China Asia AB007376 673   [9] Complete 5'-CR-I
6-ch3 C. lupus chanco Mongol, China Asia AB007377 673   [9] Complete 5'-CR-I
7-ch4 C. lupus chanco Mongol, China Asia AB007378 673   [9] Complete 5'-CR-I
8-ch5 C. lupus chanco Mongol, China Asia AB007379 673   [9] Complete 5'-CR-I
9-Wo11 C. lupus crassodon Canada N. America AF098125 707 Wo-11 [45]* Complete 5'-CR-I
10-Wo10 C. lupus crassodon Canada N. America AF098124 707 Wo-10 [45]* Complete 5'-CR-I
11-Wo9 C. lupus crassodon Canada N. America AF098123 707 Wo-9 [45]* Complete 5'-CR-I
12-Wo4 C. lupus columbianus Canada N. America AF098118 707 Wo-4 [45]* Complete 5'-CR-I
13-Wo5 C. lupus columbianus Canada N. America AF098119 707 Wo-5 [45]* Complete 5'-CR-I
14-Wo6 C. lupus columbianus Canada N. America AF098120 707 Wo-6 [45]* Complete 5'-CR-I
15-Wo7 C. lupus columbianus Canada N. America AF098121 707 Wo-7 [45]* Complete 5'-CR-I
16-Wo8 C. lupus columbianus Canada N. America AF098122 707 Wo-8 [45]* Complete 5'-CR-I
17-Wo2 C. lupus lupus Canada N. America AF098116 707 Wo-2 [45]* Complete 5'-CR-I
18-Wo3 C. lupus lupus Canada N. America AF098117 707 Wo-3 [45]* Complete 5'-CR-I
19-Wo1 C. lupus tundrarum Canada N. America AF098115 707 Wo-1 [45]* Complete 5'-CR-I
20-W27 C. lupus   China Asia AF008135 713 W-27 [18] Complete 5'-CR-I
21-W 6 C. lupus   Romania Europe AF008136 712 W-6 [18] Complete 5'-CR-I
22-W 1 C. lupus   Spain Europe AF008137 712 W-1 [18] Complete 5'-CR-I
23-W 4 C. lupus   France/Italy Europe AF008138 712 W-4 [18] Complete 5'-CR-I
24-W 5 C. lupus   Greece/Romania Europe AF008139 712 W-5 [18] Complete 5'-CR-I
25-W12 C. lupus   India Asia AF008140 712 W-12 [18] Complete 5'-CR-I
26-W15 C. lupus   SaudiArabia Asia AF008141 713 W-15 [18] Complete 5'-CR-I
27-W14 C. lupus   SaudiArabia/China Asia AF008142 712 W-14 [18] Complete 5'-CR-I
28-w 1 C. lupus   Italy-East European Europe AF115687 542 w-1 [42] Most of 5'-CR-I
29-w 2 C. lupus   Italy-East European Europe AF115688 542 w-2 [42] Most of 5'-CR-I
30-w 3 C. lupus   Italy-East European Europe AF115689 542 w-3 [42] Most of 5'-CR-I
31-w 4 C. lupus   Italy-East European Europe AF115690 542 w-4 [42] Most of 5'-CR-I
32-w 5 C. lupus   Italy-East European Europe AF115691 542 w-5 [42] Most of 5'-CR-I
33-w 7 C. lupus   Italy-East European Europe AF115692 542 w-7 [42] Most of 5'-CR-I
34-w 8 C. lupus   Italy-East European Europe AF115693 542 w-8 [42] Most of 5'-CR-I
35-w 9 C. lupus   Italy-East European Europe AF115694 542 w-9 [42] Most of 5'-CR-I
36-w 10 C. lupus   Italy-East European Europe AF115695 542 w-10 [42] Most of 5'-CR-I
37-w 11 C. lupus   Italy-East European Europe AF115696 542 w-11 [42] Most of 5'-CR-I
38-w 12 C. lupus   Italy-East European Europe AF115697 542 w-12 [42] Most of 5'-CR-I
39-w 13 C. lupus   Italy-East European Europe AF115698 542 w-13 [42] Most of 5'-CR-I
40-w 14 C. lupus   Italy-East European Europe AF115699 542 w-14 [42] Most of 5'-CR-I
41-w 15 C. lupus   Italy-East European Europe AF115700 542 w-15 [42] Most of 5'-CR-I
42-w 16 C. lupus   Italy-East European Europe AF115701 542 w-16 [42] Most of 5'-CR-I
43-w 19 C. lupus   Italy-East European Europe AF115702 542 w-19 [42] Most of 5'-CR-I
44-w 20 C. lupus   Italy-East European Europe AF115703 542 w-20 [42] Most of 5'-CR-I
45-Do9 C. familiaris   Dog    707 Do-9   Complete 5'-CR-I
46-DogABO C. familiaris   Dog   AB048590 737    Complete 5'-CR-I
47 ulpus vulpus   Red fox Japan D-83639 666   [43] Complete 5'-CR-I
48 procyonoides   Raccoon dog Japan D-83614 667   [43] Complete 5'-CR-I
49-W1 C. lupus   France/Italy/Spain Europe AF338803 342 W-1 [46]* Part of 5'-CR-I
50-W2 C. lupus   France/Italy/Spain Europe AF338804 342 W-2 [46]* Part of 5'-CR-I
51-W3 C. lupus   France/Italy/Spain Europe AF338805 342 W-3 [46]* Part of 5'-CR-I
52-W4 C. lupus   Croatia Europe AF338806 342 W-4 [46]* Part of 5'-CR-I
53-W5 C. lupus   Croatia Europe AF338807 342 W-5 [46]* Part of 5'-CR-I
54-W6 C. lupus   Portugal Europe AF338808 342 W-6 [46]* Part of 5'-CR-I
55-W7 C. lupus   Spain Europe AF338809 342 W-7 [46]* Part of 5'-CR-I
56-W8 C. lupus   Romania Europe AF338810 342 W-8 [46]* Part of 5'-CR-I
57-W9 C. lupus   Poland Europe AF338811 342 W-9 [46]* Part of 5'-CR-I
58-W10 C. lupus   Spain Europe AF338812 342 W-10 [46]* Part of 5'-CR-I
59-W2 C. lupus   Polland-Belarus Europe AF344300 257 W-2 [47]* Part of 5'-CR-I
60-W3 C. lupus   Polland-Belarus Europe AF344301 257 W-3 [47]* Part of 5'-CR-I
61-W4 C. lupus   Polland-Belarus Europe AF344302 257 W-4 [47]* Part of 5'-CR-I
62-p3 C. lupus   USA N. America AF020699 402   [44] Part of 5'-CR-I
63-W27 C. lupus   China Asia AF008160 305 W-27 [18] 3'-CR-II
64-W6a C. lupus   Romania/Russia Eurasia AF008161 304 W-6a [18] 3'-CR-II
65-W 1 C. lupus   Portugal/Spain Europe AF008162 304 W-1 [18] 3'-CR-II
66-W 4 C. lupus   France/Italy Europe AF008163 300 W-4 [18] 3'-CR-II
67-W 5 C. lupus   Greece/Romania Europe AF008164 272 W-5 [18] 3'-CR-II
68-W12 C. lupus   India Asia AF008165 304 W-12 [18] 3'-CR-II
69-W15 C. lupus   SausiArabia Asia AF008166 304 W-15 [18] 3'-CR-II
70-W14 C. lupus   SausiArabia/China Asia AF008167 304 W-14 [18] 3'-CR-II
71-w2 C. lupus   Croatia/Portugal/Swede Europe AF005296 257 w-2 [18] Part of 5'-CR-I
72-w3 C. lupus   Poland/Spain Europe AF005297 257 w-3 [18] Part of 5'-CR-I
73-w7 C. lupus   Bulgaria/SaudiArabia Eurasia AF005298 257 w-7 [18] Part of 5'-CR-I
74-w8 C. lupus   Greece Europe AF005299 257 w-8 [18] Part of 5'-CR-I
75-w9 C. lupus   Greece Europe AF005300 257 w-9 [18] Part of 5'-CR-I
76-w10 C. lupus   Estonia/Finland/Russia/Spain AF005301 257 w-10 [18] Part of 5'-CR-I
77-w11 C. lupus   Israel Asia AF005302 257 w-11 [18] Part of 5'-CR-I
78-w16 C. lupus   Iran Asia AF005303 257 w-16 [18] Part of 5'-CR-I
79-w17 C. lupus   Iran Asia AF005304 257 w-17 [18] Part of 5'-CR-I
80-w13 C. lupus   SaudiArabia Asia AF005305 257 w-13 [18] Part of 5'-CR-I
81-w18 C. lupus   Afganisathan Asia AF005306 257 w-18 [18] Part of 5'-CR-I
82-w19 C. lupus   China Asia AF005307 257 w-19 [18] Part of 5'-CR-I
83-w20 C. lupus   Alaska N. America AF005308 257 w-20 [18] Part of 5'-CR-I
84-w22 C. lupus   Alaska/Alberta/Montana/N-W territories AF005309 257 w-22 [18] Part of 5'-CR-I
85-w21 C. lupus   Yukon Europe AF005310 258 w-21 [18] Part of 5'-CR-I
86-w23 C. lupus   Yukon Europe AF005311 258 w-23 [18] Part of 5'-CR-I
87-w24 C. lupus   Yukon Europe AF005312 258 w-24 [18] Part of 5'-CR-I
88-w25 C. lupus   Mexico N. America AF005313 258 w-25 [18] Part of 5'-CR-I
89-w26 C. lupus   Russia Eurasia AF005314 257 w-26 [18] Part of 5'-CR-I
90-lu3 C. lupus   Russia Eurasia AF202894 360   [48]* Repetitive region
  1. a : Haplotype code given in the reference by the respective authors * : Unpublished reference; details taken from corresponding EMBL entries