Skip to main content

Table 1 Target data sets currently represented in GeneHopper

From: GeneHopper: a web-based search engine to link gene-expression platforms through GenBank accession numbers

Species Dataset* Elements Source
Human Sequence-validated human cDNA library 40K 41,472 Research Genetics [11]
  Affymetrix HG-U133A 22,283 Affymetrix [12]
  Affymetrix HG-U133B 22,645 Affymetrix [12]
  Human OligoLibrary 18,885 Sigma-Genosys [31]
Mouse NIA mouse 15K cDNA clone set 15,247 National Institute on Aging [32]
  MG-U74Av2 12,488 Affymetrix [12]
  MG-U74Bv2 12,477 Affymetrix [12]
  MG-U74Cv2 11,934 Affymetrix [12]
  Mouse OligoLibrary 7,524 Sigma-Genosys [31]
Rat Sequence-verified rat clone collection 28,448 Research Genetics [11]
  RG-U34A 8,799 Affymetrix [12]
  RG-U34B 8,791 Affymetrix [12]
  RG-U34C 8,789 Affymetrix [12]
  Rat OligoLibrary 4,848 Sigma-Genosys [31]
  1. *Not all Affymetrix arrays are presented in the table: most older versions and all subset arrays are available in GeneHopper as well.