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Table 2 Examples of sequence misassignment errors

From: Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence

Clone*

Location

Size of region involved (bp)

e-PCR results

AC121339†

3q13.13

193,190

chrX

AC016003

17q21.31

181,582

chr9

AC119723

3q22.1

159,924

chr6

AC093007

3q12.1

169,882

chr6

AC110578

8p23.2

160,554

chr15

AC108862

11p15.3

156,150

chr18

AC113009

8q23.1

155,171

chr11

AC104765

8q12.1

150,029

chr18

AC105412

2p13.1

144,924

chr5

AC092744

12p12.3

144,009

chr4

AC099061

1p21.3

140,516

chr15

AC108735

3p24.3

136,005

chr16

AC122689

3q23

120,057

chr12

AC017027

1q32.1

116,265

chr5

AC013530

3q26.1

99,768

chr8

AC115093

11p15.4

98,715

chr1

AC112921

Xp22.22

96,272

chr3

AC108094

16q21

94,953

chr17

AC079186

8q12.1

78,771

chr7

AC024573

Unmapped

56,016

chr2

AC115093

11p15.4

53,858

chr1

  1. **A full list can be obtained from [12]. †See Figure 2 for e-PCR results supporting sequence misassignment.