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Table 1 List of TCL (tumor-classifier) genes

From: Identification of expressed genes linked to malignancy of human colorectal carcinoma by parametric clustering of quantitative expression data

GS number

Accession number

Symbol

Annotation

GS2892

NM_004368

CNN2*

Homo sapiens calponin 2 (CNN2), mRNA

GS3019

NM_003348

UBE2N*

Homo sapiens ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) (UBE2N)

GS3386

NM_003337

UBE2B*

Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNA

GS3387

NM_013317

hT1a-1*

Homo sapiens hT1a-1 (hT1a-1), mRNA

GS3588

AF131848

*

Homo sapiens clone 24922 mRNA sequence, complete coding sequence

GS4015

NM_005433

YES1*

Homo sapiens v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 (YES1), mRNA

GS4022

NM_002433

MOG*

Homo sapiens myelin oligodendrocyte glycoprotein (MOG), mRNA

GS4163

AC007565

*

Homo sapiens chromosome 19, cosmid R27656, complete sequence

GS4780

AD001530

*

Homo sapiens XAP-5 mRNA, complete coding sequence

GS4941

NM_016380

*

Homo sapiens differentiation-related protein dif13 (LOC51212), mRNA

GS4945

NM_016343

CENPF*

Homo sapiens centromere protein F (350/400 kD, mitosin) (CENPF), mRNA

GS4946

NM_002439

MSH3*

Homo sapiens mutS (E. coli) homolog 3 (MSH3), mRNA

GS3170

L35240

†

Human enigma gene, complete coding sequence

GS715

AL096800

†

Human DNA sequence from clone RP1-303A1 on chromosome 6

GS3002

AL023806

STM2 †

Human DNA sequence from clone 466P17 on chromosome 6q24

GS1102

Y18000

NF2 †

Homo sapiens NF2 gene

GS5239

AL139229

†

Human DNA sequence from clone RP4-540A13 on chromosomeXq22.1-22.3

GS4947

NM_018520

 

Homo sapiens hypothetical protein PRO2268 (PRO2268), mRNA

GS1341

AC006165

 

Homo sapiens clone UWGC:y54c125 from 6p21, complete sequence

GS4512

NM_005768

C3F

Homo sapiens putative protein similar to nessy (Drosophila) (C3F), mRNA

GS4501

AF261689

 

Homo sapiens DNA polymerase epsilon p17 subunit gene, complete coding sequence

GS6969

AL022316

 

Human DNA sequence from clone CTA-126B4 on chromosome 22q13.2-13.31

GS6493

AF113695

 

Homo sapiens clone FLB5224 PRO1365 mRNA, complete coding sequence

M15990

M15990

yes

yes

  1. *Group GM-C genes used in the experiment detailed in Figure 3. †Additional genes in group C.